Your message dated Sun, 10 Jul 2016 15:11:58 +0200
with message-id <[email protected]>
and subject line slicer was removed from Debian in 2013
has caused the Debian Bug report #586205,
regarding slicer: gets stuck parsing directory
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
586205: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=586205
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: slicer
Version: 3.4.0~svn10438-6
Severity: normal


Hello,
it happens with some of my volumes.

 - menu "File - Add Volume"
 - select directory which contains the series
 - click on "Parse directory" button
 - it opens a tiny window that says "Examining files ..." until 100%
 - it gets stuck on "Organizing Files..." message

Command line output:

$ slicer3
Starting Slicer: /usr
Generic Warning: In 
/build/buildd-vtk_5.4.2-6-i386-VcAHXL/vtk-5.4.2/Common/vtkTclUtil.cxx, line 726
Error returned from vtk/tcl callback:
::LoadVolume::loadVolume0 processEvent vtkObj5672
can't read "refHeader(0020|0037,value)": no such element in array
    while executing
"set refOrientation $refHeader($ORIENTATION,value)"
    (object "::LoadVolume::loadVolume0" method 
"::LoadVolume::organizeDICOMSeries" body line 86)
    invoked from within
"$this organizeDICOMSeries tree"
    (object "::LoadVolume::loadVolume0" method 
"::LoadVolume::parseDICOMDirectory" body line 89)
    invoked from within
"$this parseDICOMDirectory $dir _dicomTree"
    (object "::LoadVolume::loadVolume0" method "::LoadVolume::processEvent" 
body line 98)
    invoked from within
"::LoadVolume::loadVolume0 processEvent vtkObj5672" at line number 1



Thanks.


-- System Information:
Debian Release: squeeze/sid
  APT prefers testing
  APT policy: (990, 'testing'), (500, 'unstable'), (1, 'experimental')
Architecture: i386 (i686)

Kernel: Linux 2.6.32-3-686 (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages slicer depends on:
ii  itcl3             3.4~b1-2               [incr Tcl] OOP extension for Tcl -
ii  iwidgets4         4.0.1-5                [incr Widgets] Tk-based widget col
ii  libc6             2.10.2-9               Embedded GNU C Library: Shared lib
ii  libcurl3          7.20.1-2               Multi-protocol file transfer libra
ii  libfreetype6      2.3.11-1               FreeType 2 font engine, shared lib
ii  libgcc1           1:4.4.4-1              GCC support library
ii  libgdcm2.0        2.0.14-9               Grassroots DICOM runtime libraries
ii  libgl1-mesa-glx [ 7.7.1-2                A free implementation of the OpenG
ii  libinsighttoolkit 3.16.0-1               Image processing toolkit for regis
ii  libkwwidgets1.0.0 1.0.0~cvs20090825-4+b1 Cross-Platform GUI Toolkit - runti
ii  libopenigtlink1   1.0.0~svn6270-1        Open IGT Link is a simple network 
ii  libslicer3        3.4.0~svn10438-6       software package for visualization
ii  libstdc++6        4.4.4-1                The GNU Standard C++ Library v3
ii  libvtk5.4         5.4.2-6                Visualization Toolkit - A high lev
ii  slicer-data       3.4.0~svn10438-6       software package for visualization
ii  tcl8.5            8.5.8-2                Tcl (the Tool Command Language) v8
ii  tcl8.5-kwwidgets  1.0.0~cvs20090825-4+b1 Cross-Platform GUI Toolkit - TCL/T
ii  tcllib            1.12-dfsg-2            the Standard Tcl Library
ii  vtk-tcl           5.4.2-6                Tcl bindings for VTK

slicer recommends no packages.

slicer suggests no packages.

-- no debconf information



--- End Message ---
--- Begin Message ---
Version: 3.6.3~svn16592-1+rm

slicer was last released with Debian 6.0 (squeeze) in
February 2011 and removed from Debian sid/unstable in 2013 (see
http://bugs.debian.org/644352 for details on the removal). Since
support for squeeze and squeeze-LTS has now ended, I'm closing all the
remaining bugs reported against this package.

Andreas

--- End Message ---

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