Your message dated Thu, 01 Dec 2016 09:34:25 +0000 with message-id <e1ccnl3-000if7...@fasolo.debian.org> and subject line Bug#846330: fixed in pirs 2.0.2+dfsg-2 has caused the Debian Bug report #846330, regarding pirs: FTBFS on non-x86 architectures because it hard-wires CFLAGS to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 846330: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=846330 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: pirs Version: 2.0.2+dfsg-1 Severity: serious Justification: fails to build from source User: debian-sp...@lists.debian.org Usertags: sparc64 Hello! pirs fails to build from source on all non-x86 architectures because it hard-wires compiler flags and tries to build with -msse2 despite the fact that this is an x86-only compiler flag: g++ -DHAVE_CONFIG_H -I. -I.. -DSFMT_MEXP=19937 -DPKGDATADIR='"/usr/share/pirs"' -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -msse2 -fopenmp -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pirs-2.0.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o InputStream.o InputStream.cpp g++: error: unrecognized command line option '-msse2' Please adjust your debian/rules or patch the upstream build system to use -msse2 on supported targets only. Thanks, Adrian -- .''`. John Paul Adrian Glaubitz : :' : Debian Developer - glaub...@debian.org `. `' Freie Universitaet Berlin - glaub...@physik.fu-berlin.de `- GPG: 62FF 8A75 84E0 2956 9546 0006 7426 3B37 F5B5 F913
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--- Begin Message ---Source: pirs Source-Version: 2.0.2+dfsg-2 We believe that the bug you reported is fixed in the latest version of pirs, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 846...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Ghislain Antony Vaillant <ghisv...@gmail.com> (supplier of updated pirs package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 30 Nov 2016 13:22:22 +0000 Source: pirs Binary: pirs pirs-profiles pirs-examples Architecture: source amd64 all Version: 2.0.2+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Ghislain Antony Vaillant <ghisv...@gmail.com> Description: pirs - Profile based Illumina pair-end Reads Simulator pirs-examples - profile basd Illumina pair-end Reads Simulator (example data) pirs-profiles - profile basd Illumina pair-end Reads Simulator (profile data) Closes: 846330 Changes: pirs (2.0.2+dfsg-2) unstable; urgency=medium . * Team upload. . [ Ghislain Antony Vaillant ] * Add patch fixing spelling of sse2 option. * Disable SSE2 optimization for all but amd64. Thanks to John Paul Adrian Glaubitz for reporting (Closes: #846330) Checksums-Sha1: 4f4721b0e2986a471029a55bb06b839dbff319e9 2109 pirs_2.0.2+dfsg-2.dsc e84d8d464b331be8c9e8d5d99c6e488a06bef7c4 5476 pirs_2.0.2+dfsg-2.debian.tar.xz 28e0f7018326e9068d3fa19e43f2d1bbb7892ac1 321200 pirs-dbgsym_2.0.2+dfsg-2_amd64.deb 3ffd2fb35a8118456edc2052571e55d97afad336 1947912 pirs-examples_2.0.2+dfsg-2_all.deb da5ca0f131bdbd1397d4bd81b38a8673851a9d28 2565432 pirs-profiles_2.0.2+dfsg-2_all.deb bf1f456e9e972032e798c2c2c214a4baf5f21c3b 5544 pirs_2.0.2+dfsg-2_amd64.buildinfo 76a8291e4f814d90135569642732b364772236c8 112902 pirs_2.0.2+dfsg-2_amd64.deb Checksums-Sha256: 94e04064961310247eb9b43b443017fe27a31078f380a32fb361ac14a8e66d64 2109 pirs_2.0.2+dfsg-2.dsc ad918996b2d5b575217c8f0a4c4dd6619a37f62a93ade3679a6d50435b1cd77a 5476 pirs_2.0.2+dfsg-2.debian.tar.xz 11cba95068dc1b87f06d6b8851c122d67835226f78bbbb0a86d697055b7ed005 321200 pirs-dbgsym_2.0.2+dfsg-2_amd64.deb 964330801e9f0a4d7efe3b8344b18c2d44ddc7c35baac8aca4b94f88f43610d0 1947912 pirs-examples_2.0.2+dfsg-2_all.deb 7d74f51a6a44c869f8b7b484875a7f31007beb969e242e4e1c0b1735ac966960 2565432 pirs-profiles_2.0.2+dfsg-2_all.deb 7972897c616235826671c640922eac61d320ea3f36f997628e2e62be2d3b91fd 5544 pirs_2.0.2+dfsg-2_amd64.buildinfo b528ece86def2faa73f5f4afa0052d265209eeafffe68fac5b254fc0f8674404 112902 pirs_2.0.2+dfsg-2_amd64.deb Files: 56b727e5ef8b71294ac74d7d6c2a3611 2109 science optional pirs_2.0.2+dfsg-2.dsc c3c6e5e9629fb9680db7af22ac83b771 5476 science optional pirs_2.0.2+dfsg-2.debian.tar.xz 04a08f22330ac3170cb161557337f831 321200 debug extra pirs-dbgsym_2.0.2+dfsg-2_amd64.deb 3572b600d522cfad15dae5e5fdbaf882 1947912 science optional pirs-examples_2.0.2+dfsg-2_all.deb 522a22c302c2cb1eb9df1d1fc7b78dcb 2565432 science optional pirs-profiles_2.0.2+dfsg-2_all.deb 24b4ddc3bf96cd04bf430817e753df63 5544 science optional pirs_2.0.2+dfsg-2_amd64.buildinfo 2b8d872f7bc0cd9a4c279c16554091e0 112902 science optional pirs_2.0.2+dfsg-2_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJYP+atAAoJEFeKBJTRxkbRYIcP/A/2IJw2jPhc4lhBfxqheWa1 SEc/MDi3UGLDHhWxFlEG1hyuhQm8vXHA52jj4KbvQRsIuM4nETCIJKn9MmMunk6Q hmtIVrsOzvT7sunteiA327wHSleAn9u0tZdb4DQma0ADdhE1xTp0Avqu0OOe6YjF o2cwqM+EJIAGqTbZ+IK6y41aK0VX4yZBBThemubg4G12MyRXgODmL9rp0nGBLct/ pc5hpgsfBS6jJTtO6qcwalivdTFpGLE7F5XOWZNn21Pm5Cxxaf7aW900T+Y6sqJu STkXtKxi9y3qd/h/vFukuJ9+y9ergZOBPItinMYE4432AOqNy+YCk6+rrSguF9tY 7tiIzeVNcZSsXrSsiNdk4feC8d4we93Jr0w0zrtGBGR6KbjUFW3g7WqpD1fPZIbh yMpZGp1YWLuCXrqff0BEtDqvk2rWJKeFpeI3kDOPboS4ENT8oEB7O+/uKa8KrKMI vz7CKtfIFhrdsF5P7K1MF6fpOP/198HJgMj/NGlWpO4OA5UFxeohpVE/07YOO6UK /PX5bpilBDsMP6yDyzyxY5+XAwqaXcrfjYG7UeVyoFPqjb4U+9fTqk2uD+3YeVlE 6HITmo62kDdKlU1xWRIKOutK3Jhwkh8SsrAiBO/4Gu3zeHbZ+dHxRln499aRxLKQ CmCqivvzFpb/6G1qpLtd =5TWS -----END PGP SIGNATURE-----
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