Your message dated Tue, 06 Dec 2016 09:04:21 +0000 with message-id <[email protected]> and subject line Bug#833392: fixed in hilive 0.3-1 has caused the Debian Bug report #833392, regarding hilive: FTBFS: assumes uint64_t is unsigned long to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 833392: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=833392 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: hilive Version: 0.0+20150926-1 Severity: important Justification: fails to build from source Hi, Andreas. Builds of hilive for 32-bit architectures such as i386 have been failing: /«BUILDDIR»/hilive-0.0+20150926/lib/alnblock.cpp:202:19: error: prototype for 'long unsigned int DatasetAlignment::deserialize_file(std::__cxx11::string)' does not match any in class 'DatasetAlignment' unsigned long int DatasetAlignment::deserialize_file(std::string f /* = "" */) { ^ In file included from /«BUILDDIR»/hilive-0.0+20150926/lib/alnblock.cpp:1:0: /«BUILDDIR»/hilive-0.0+20150926/lib/alnblock.h:62:12: error: candidate is: uint64_t DatasetAlignment::deserialize_file(std::__cxx11::string) uint64_t deserialize_file(std::string f = ""); ^ Please consistently use one type or the other here, and anywhere else that conflates these types. (I haven't looked further.) Thanks!
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--- Begin Message ---Source: hilive Source-Version: 0.3-1 We believe that the bug you reported is fixed in the latest version of hilive, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <[email protected]> (supplier of updated hilive package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 06 Dec 2016 09:15:22 +0100 Source: hilive Binary: hilive Architecture: source amd64 Version: 0.3-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Andreas Tille <[email protected]> Description: hilive - realtime alignment of Illumina reads Closes: 833392 Changes: hilive (0.3-1) unstable; urgency=medium . [Andreas Tille] * New upstream location with proper tagging, Closes: #833392 * debhelper 10 . [Gert Wollny] * d/control: Add libseqan2-dev and libhts-dev as build dependency * d/patches/use_...: correct path to cmake modules for FindSeQan an remove forced CXXFLAGS Checksums-Sha1: d99e7d9d75750df4b0103ebc536a3a2f2facd07a 2022 hilive_0.3-1.dsc b799f7c7788bb845947b3c22d65fe7657d663fef 36151 hilive_0.3.orig.tar.gz 904d8c868bf2a5508fce8d73433b935ab45e93c2 5132 hilive_0.3-1.debian.tar.xz f7827353c54aba97336632f6e00c9c06bb994e56 1770568 hilive-dbgsym_0.3-1_amd64.deb 290306a2c39d42baaa639ae219f3a75cf686b6d7 6229 hilive_0.3-1_amd64.buildinfo fd97a36b2c0646c74da22eca8c7946f5ced1e278 291078 hilive_0.3-1_amd64.deb Checksums-Sha256: 4fea3bad5fc3b75628429ca54d31f826fff7340ea248d4e71bb54666a186ae81 2022 hilive_0.3-1.dsc ecd8a208e2cf32e633d46d360ce02b61a1bb4dec573ba37e4ed8d7acbcdd9805 36151 hilive_0.3.orig.tar.gz 13aa72ebf9d3ef2fde90cbb3a692621bbdbe7c425cf2f0e0c2e87574e48f3829 5132 hilive_0.3-1.debian.tar.xz b6a87050e1f2a8b761412ac691d22711f5cd077b3e8fca75e8675d04000940af 1770568 hilive-dbgsym_0.3-1_amd64.deb 55b266a5d3f376a9ce516540f434c5c3e4785f46ae8e081b01f3d618786a4f45 6229 hilive_0.3-1_amd64.buildinfo bb2290564d000b4ad94c967bcadd3e001db344cf11e7e925ae23b91136e3f557 291078 hilive_0.3-1_amd64.deb Files: af59408fa2a78c2ab68f5aecd5006a35 2022 science optional hilive_0.3-1.dsc 2c7fd6e272879d38187c4754b61205fc 36151 science optional hilive_0.3.orig.tar.gz a7fa5f3a182c3585936ff42f285a2103 5132 science optional hilive_0.3-1.debian.tar.xz d57789f0b92bf889f5c8b459a12366a3 1770568 debug extra hilive-dbgsym_0.3-1_amd64.deb 496a26057d717b11d2c36a26f6498bce 6229 science optional hilive_0.3-1_amd64.buildinfo 159de9845fb7b9e5ece10c3eb091fb9d 291078 science optional hilive_0.3-1_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJYRnqwAAoJEFeKBJTRxkbRwSEP/0NPfI1NKxtEGxO4Vibcj/bL x+KoDK+O81sJnQdDPbDudSLOC32SU2MPOYp5IEbgBu3m8AfeqcBxhip3YhF2LwrZ EsHScsFSrovLoaUL+Jt0IrmwSmpf2qclxgEIDqqkcV4P8Mf3EkVOgZDSihxN5SyR xh3OcPyPbj2XSBqAr4A+ReiTKOk36g4EBS5vxb0KgEWdjok0P8N8h7xUUZzEJkgZ Ag9Cihzc9MZmP54ofktpnKQnoae/hiL32UnI3SjWQq0Uv0zpA3vESkiEn/utyaEf zewPhIGsBRwyB+cujd6nzy9ZhC4J4MK7r154a3HgrbovNYSUotPCloGkKi353WX/ iVhr9GH+TfJ4vaf+r9e4OT9JEm1ZkoDUOfjdLr1PflPpTUJupPM7OJ975o5/oWsk Qa+frfEGoVgPhhhqZryDBjeyDP3bcE4OkKfxm+kN3gAGxVmPYnYHHT0GVa2q7Czr WReObgWE9zNRrqgLhV5xK1xd6ANjI1UEHeByLhPBtnUVDgv8Zx+ZlpdnC6ksH3l3 5mZa30CDSxClpKysbGLqrpN7Wmz4IHQj8WozK8EgOpdXCa+llR610gRGO89nU08v lQ82LPcQh4MHh8NsU6sunbqnkNhtrUv7VBzp/4ij8rYd1nlBuEFMFQQgaRLL6SHn Seh2I+MnRUi7lUMbOX9v =UCsi -----END PGP SIGNATURE-----
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