Your message dated Wed, 07 Dec 2016 12:34:02 +0000 with message-id <[email protected]> and subject line Bug#847339: fixed in pirs 2.0.2+dfsg-3 has caused the Debian Bug report #847339, regarding pirs: FTBFS when built with dpkg-buildpackage -A (cp: cannot create regular file [...]: No such file or directory) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 847339: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=847339 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: src:pirs Version: 2.0.2+dfsg-2 Severity: serious Tags: patch Dear maintainer: I tried to build this package in stretch with "dpkg-buildpackage -A" (which is what the "Arch: all" autobuilder would do to build it) but it failed: -------------------------------------------------------------------------------- [...] debian/rules build-indep dh build-indep --with autoreconf --sourcedirectory=src dh_testdir -i -O--sourcedirectory=src dh_update_autotools_config -i -O--sourcedirectory=src debian/rules override_dh_autoreconf make[1]: Entering directory '/<<BUILDDIR>>/pirs-2.0.2+dfsg' #cd src && ./genauto.sh cd src && \ mv INSTALL INSTALL.save && \ autoreconf --install && \ mv INSTALL.save INSTALL && \ cd /<<BUILDDIR>>/pirs-2.0.2+dfsg configure.ac:9: installing './compile' [... snipped ...] fakeroot debian/rules binary-indep dh binary-indep --with autoreconf --sourcedirectory=src dh_testroot -i -O--sourcedirectory=src dh_prep -i -O--sourcedirectory=src debian/rules override_dh_auto_install make[1]: Entering directory '/<<BUILDDIR>>/pirs-2.0.2+dfsg' dh_auto_install --sourcedirectory=src/stator/gcContCvgBias make[1]: Leaving directory '/<<BUILDDIR>>/pirs-2.0.2+dfsg' debian/rules override_dh_install make[1]: Entering directory '/<<BUILDDIR>>/pirs-2.0.2+dfsg' dh_install mkdir -p debian/pirs/usr/lib/pirs find src -name "*.pl" -exec cp -a \{\} debian/pirs/usr/lib/pirs \; rm -f debian/pirs/usr/lib/pirs/autobam.pl sed -i 's:#!/bin/env:#!/usr/bin/env:' debian/pirs/usr/lib/pirs/*.pl make[1]: Leaving directory '/<<BUILDDIR>>/pirs-2.0.2+dfsg' debian/rules override_dh_installdocs make[1]: Entering directory '/<<BUILDDIR>>/pirs-2.0.2+dfsg' dh_installdocs cp -a src/stator/readme.txt debian/pirs/usr/share/doc/pirs/strator_readme.txt cp: cannot create regular file 'debian/pirs/usr/share/doc/pirs/strator_readme.txt': No such file or directory debian/rules:60: recipe for target 'override_dh_installdocs' failed make[1]: *** [override_dh_installdocs] Error 1 make[1]: Leaving directory '/<<BUILDDIR>>/pirs-2.0.2+dfsg' debian/rules:17: recipe for target 'binary-indep' failed make: *** [binary-indep] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary-indep gave error exit status 2 -------------------------------------------------------------------------------- This happens because debian/pirs/[...] does not exist, as we are creating arch-independent packages only. Tha (trivial) patch below should probably work, but I would use debian/pirs.docs instead to have an even shorter debian/rules. Please consider uploading in source-only form as soon as you can (i.e. after the first upload, where source-only uploads are not allowed yet). That way we will prevent bugs like this one to propagate to testing and also we will have official build logs available here: https://buildd.debian.org/status/package.php?p=pirs Thanks. --- a/debian/rules +++ b/debian/rules @@ -56,6 +56,6 @@ override_dh_link: override_dh_installchangelogs: dh_installchangelogs NEWS -override_dh_installdocs: +override_dh_installdocs-arch: dh_installdocs cp -a src/stator/readme.txt debian/$(DEBPKGNAME)/usr/share/doc/$(DEBPKGNAME)/strator_readme.txt
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--- Begin Message ---Source: pirs Source-Version: 2.0.2+dfsg-3 We believe that the bug you reported is fixed in the latest version of pirs, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <[email protected]> (supplier of updated pirs package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 07 Dec 2016 13:01:38 +0100 Source: pirs Binary: pirs pirs-profiles pirs-examples Architecture: source amd64 all Version: 2.0.2+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Andreas Tille <[email protected]> Description: pirs - Profile based Illumina pair-end Reads Simulator pirs-examples - profile basd Illumina pair-end Reads Simulator (example data) pirs-profiles - profile basd Illumina pair-end Reads Simulator (profile data) Closes: 847339 Changes: pirs (2.0.2+dfsg-3) unstable; urgency=medium . * Fix build for -A Closes: #847339 * debhelper 10 * d/watch: version=4 Checksums-Sha1: 6935b389c1ce52e7d1d80e5d26c1c53bd899644f 2149 pirs_2.0.2+dfsg-3.dsc ae32f0c7b36e212f97295d69a32bdddb91c6e724 5540 pirs_2.0.2+dfsg-3.debian.tar.xz ee5a7dfc2e4063e68a6a9085c78a5e82db833d41 321188 pirs-dbgsym_2.0.2+dfsg-3_amd64.deb 814018c587b2294d4775c7c5b810645979b59c1b 1947986 pirs-examples_2.0.2+dfsg-3_all.deb 5720460b38728a31be4d187eaa1bdf212215e957 2565504 pirs-profiles_2.0.2+dfsg-3_all.deb 1ffed4c9147b2edd0812749aee26700b9287314f 5816 pirs_2.0.2+dfsg-3_amd64.buildinfo f89a06ff22e81208f7b303743795fe0571764d89 112962 pirs_2.0.2+dfsg-3_amd64.deb Checksums-Sha256: bd928a2055e0e0cc2d35ed3ac80ffcd97dd3e9783448067858554e30b12a461e 2149 pirs_2.0.2+dfsg-3.dsc 19e0ff4b97adfe9ee60f93c84a5f10f035cbbffbb2a5640250ecd222ed15c86a 5540 pirs_2.0.2+dfsg-3.debian.tar.xz c1964eb729043a8068ce69366940ed483033b80ed2c727977967b8cfd5f7ad8a 321188 pirs-dbgsym_2.0.2+dfsg-3_amd64.deb 4647d0fb65211d00e19b4fac35664cf131ddc80b2b1b1a59b4196d8b29761fe1 1947986 pirs-examples_2.0.2+dfsg-3_all.deb 535e74a73dcba6dca3edc38d744ad10cd647780195677e339a37e04df8793051 2565504 pirs-profiles_2.0.2+dfsg-3_all.deb d57a6795e12a680e4aa3e638b2acda2ac576ca876aa7816dc8bfa45aef085439 5816 pirs_2.0.2+dfsg-3_amd64.buildinfo 77176d8be047021b898d622a4de79d9be0b19016106ff6210f77863ccec73bd2 112962 pirs_2.0.2+dfsg-3_amd64.deb Files: ecb5e7b8d93ecf25a775a3639f2f6ca0 2149 science optional pirs_2.0.2+dfsg-3.dsc e1758918e34dccd81f0883e383492a64 5540 science optional pirs_2.0.2+dfsg-3.debian.tar.xz f2f9cb8414a99b9c1daf037e8505685a 321188 debug extra pirs-dbgsym_2.0.2+dfsg-3_amd64.deb d215b5ec26a592e1029c15fe025184ca 1947986 science optional pirs-examples_2.0.2+dfsg-3_all.deb 631011caf4e6242ddc9cff9c3da4f091 2565504 science optional pirs-profiles_2.0.2+dfsg-3_all.deb 67f0e0769c9ea5c671edf0b357e3fb22 5816 science optional pirs_2.0.2+dfsg-3_amd64.buildinfo e697bd1d8e91f08939c750e8e1aa1bbb 112962 science optional pirs_2.0.2+dfsg-3_amd64.deb -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlhH+nARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtE0Hw/+M/uP+IVzxHkNXjq1lVrE2dm8Yd0NgA7o BRNp/YujbjeG83ghF8qqI/bn9kdB+c+1ySsFcGI0K6cttelZkG61A1Hn1YdTohil bWZX+17UUpmLfsGgAlHpRXPxAunNRftWRpCjxhB7OZb8TM9Z7aUfkA1jbgQsOzyT 9Z21NtOI37UFZqMmJ8n3G7506jYZTr9/YsDELPrpMQREAiyFswCfO6ceIjE8IuJ3 +20PLZ6JsxBldhAdFp7a9Ob8onK54K7Djxq1FqZNaSVaVPQ1HId/q8wCV7RG3N1F nRFVti6nOzZfEpCRF77rvXYMZNEzFb+ohYiZdiwjggoZk3BhsVdZw7rCaxBqFeuf GmW3G50r5Ik2umyoqLu8EPE/VW7cFFW+viqMzBec3MQDDqDMb7RgriuAom3l+fCh hqFySq835A3pbL9giQNGqGXzl6rjI6bP7eMSAn8i0/OGV/rHMFxKD6HxdnqvtSsn vC/HI209eX2hURO7SSP5weZ7T7CYrv6f/YfeRtaye0gwhLDT3bXKNrg/nWbtihiZ EugDrO8FynOd4q4B2v51IuHGYHMeGFDIIHJIf3pc52yOeQEQDW16IqWbeHAtZup+ YnZqEW5Ou18yVXCEE+1cM7x1RpVwEHD7thNqcaoxhJJ2CB6wlEmmZTkoTW8LdrLD 5rVLw01KHd8= =dPbg -----END PGP SIGNATURE-----
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