Your message dated Tue, 08 Aug 2017 21:09:37 +0000
with message-id <e1dfbkv-00076r...@fasolo.debian.org>
and subject line Bug#871513: fixed in muscle 1:3.8.31+dfsg-3
has caused the Debian Bug report #871513,
regarding muscle FTCBFS: hard codes the build architecture compiler g++
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
871513: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=871513
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: muscle
Version: 1:3.8.31+dfsg-2
Tags: patch
User: helm...@debian.org
Usertags: rebootstrap

muscle fails to cross build from source, because it hard codes the build
architecture compiler in the patched makefile. Updating the patch to use
$(CXX) fixes the build. Please consider applying the attached patch.

Helmut
diff --minimal -Nru muscle-3.8.31+dfsg/debian/changelog 
muscle-3.8.31+dfsg/debian/changelog
--- muscle-3.8.31+dfsg/debian/changelog 2016-06-30 08:39:17.000000000 +0200
+++ muscle-3.8.31+dfsg/debian/changelog 2017-08-08 20:30:21.000000000 +0200
@@ -1,3 +1,11 @@
+muscle (1:3.8.31+dfsg-2.1) UNRELEASED; urgency=medium
+
+  * Non-maintainer upload.
+  * Fix FTCBFS: Do not hard code build architecture compiler g++. (Closes:
+    #-1)
+
+ -- Helmut Grohne <hel...@subdivi.de>  Tue, 08 Aug 2017 20:30:21 +0200
+
 muscle (1:3.8.31+dfsg-2) unstable; urgency=low
  
   * Team upload
diff --minimal -Nru muscle-3.8.31+dfsg/debian/patches/makefile.patch 
muscle-3.8.31+dfsg/debian/patches/makefile.patch
--- muscle-3.8.31+dfsg/debian/patches/makefile.patch    2016-06-30 
08:39:17.000000000 +0200
+++ muscle-3.8.31+dfsg/debian/patches/makefile.patch    2017-08-08 
20:30:13.000000000 +0200
@@ -20,7 +20,7 @@
 +      $(CXX) -c -D_FILE_OFFSET_BITS=64 -DNDEBUG=1 $(LDLIBS) $(CXXFLAGS) 
$(CPPFLAGS) $(LDFLAGS) -o $@ $<
 +
 +muscle: $(ObjNames)
-+      g++ $(LDLIBS) $(CXXFLAGS) $(CPPFLAGS) $(LDFLAGS) -o muscle $(ObjNames)
++      $(CXX) $(LDLIBS) $(CXXFLAGS) $(CPPFLAGS) $(LDFLAGS) -o muscle 
$(ObjNames)
 +
 +clean:
 +      $(RM) *.o make.err make.out muscle

--- End Message ---
--- Begin Message ---
Source: muscle
Source-Version: 1:3.8.31+dfsg-3

We believe that the bug you reported is fixed in the latest version of
muscle, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 871...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sascha Steinbiss <sa...@debian.org> (supplier of updated muscle package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 08 Aug 2017 22:06:30 +0200
Source: muscle
Binary: muscle
Architecture: source amd64
Version: 1:3.8.31+dfsg-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <sa...@debian.org>
Description:
 muscle     - Multiple alignment program of protein sequences
Closes: 871513
Changes:
 muscle (1:3.8.31+dfsg-3) unstable; urgency=medium
 .
   * Team upload.
   * Fix FTCBFS: Do not hard code build architecture compiler g++.
     Thanks to Helmut Grohne for the patch.
     Closes: #871513
   * Bump Standards-Version.
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--- End Message ---

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