Your message dated Wed, 20 Jun 2018 00:04:11 +0000
with message-id <[email protected]>
and subject line Bug#901519: fixed in gdcm 2.8.6-3
has caused the Debian Bug report #901519,
regarding gdcm: FTBFS: xsltApplySequenceConstructor: A potential infinite
template recursion was detected.
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
901519: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=901519
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: gdcm
Version: 2.8.6-2exp1python3
Severity: serious
Justification: fails to build from source (but built successfully in the past)
Hi,
gdcm/experimental FTBFS in an up-to-date minimal sid+experimental
pbuilder environment, in both amd64 and i386:
[323/644] cd /build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen &&
/usr/bin/cmake -E copy /build/gdcm-2.8.6/Utilities/doxygen/man/gdcmdump.xml
/build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen/gdcmdum
p.xml && /usr/bin/xsltproc --param man.output.quietly 1 --nonet
/build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen/gdcmdump.xml
FAILED: Utilities/doxygen/gdcmdump.1
cd /build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen && /usr/bin/cmake
-E copy /build/gdcm-2.8.6/Utilities/doxygen/man/gdcmdump.xml
/build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen/gdcmdump.xml && /
usr/bin/xsltproc --param man.output.quietly 1 --nonet
/build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen/gdcmdump.xml
runtime error: file
file:/usr/share/xml/docbook/stylesheet/docbook-xsl-ns/lib/lib.xsl line 62
element variable
xsltApplySequenceConstructor: A potential infinite template recursion was
detected.
You can adjust xsltMaxDepth (--maxdepth) in order to raise the maximum number
of nested template calls and variables/params (currently set to 3000).
Templates:
#0 name string.subst
#1 name string.subst
#2 name string.subst
#3 name string.subst
#4 name string.subst
#5 name string.subst
#6 name string.subst
#7 name string.subst
#8 name string.subst
#9 name string.subst
#10 name string.subst
#11 name string.subst
#12 name string.subst
#13 name string.subst
#14 name string.subst
Variables:
#0
replacement
target
string
#1
target
string
#2
string
#3
replacement
target
string
#4
target
string
#5
string
#6
replacement
target
string
#7
target
string
#8
string
#9
replacement
target
string
#10
target
string
#11
string
#12
replacement
target
string
#13
target
string
#14
string
no result for
/build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen/gdcmdump.xml
[324/644] cd /build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen &&
/usr/bin/cmake -E copy /build/gdcm-2.8.6/Utilities/doxygen/man/gdcmgendir.xml
/build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen/gdcmgendir.xml &&
/usr/bin/xsltproc --param man.output.quietly 1 --nonet
/build/gdcm-2.8.6/obj-x86_64-linux-gnu/Utilities/doxygen/gdcmgendir.xml
[325/644] /usr/bin/c++
-DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)"
-DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)"
-DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)"
-DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)"
-DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)"
-DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)"
-DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)"
-DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)"
-DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)"
-DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)"
-DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)"
-DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)"
-DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)"
-DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -Dvtkgdcm_EXPORTS
-I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi
-I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/include/python3.6m
-I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2
-I/usr/include/tcl -ISource/Common -I../Source/Common
-I../Source/DataStructureAndEncodingDefinition
-I../Source/MediaStorageAndFileFormat -I../Source/DataDictionary
-I../Utilities/VTK -I/usr/lib/jvm/java-8-openjdk-amd64/include
-I/usr/lib/jvm/java-8-openjdk-amd64/include/linux -g -O2
-fdebug-prefix-map=/build/gdcm-2.8.6=. -fstack-protector-strong -Wformat
-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT
Utilities/VTK/CMakeFiles/vtkgdcm.dir/vtkGDCMThreadedImageReader2.cxx.o -MF
Utilities/VTK/CMakeFiles/vtkgdcm.dir/vtkGDCMThreadedImageReader2.cxx.o.d -o
Utilities/VTK/CMakeFiles/vtkgdcm.dir/vtkGDCMThreadedImageReader2.cxx.o -c
../Utilities/VTK/vtkGDCMThreadedImageReader2.cxx
[326/644] /usr/bin/c++
-DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)"
-DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)"
-DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)"
-DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)"
-DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)"
-DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)"
-DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)"
-DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)"
-DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)"
-DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)"
-DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)"
-DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)"
-DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)"
-DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)"
-Dvtkgdcmsharpglue_EXPORTS -I/usr/include/vtk-7.1 -I/usr/include/freetype2
-I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi
-I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/include/python3.6m
-I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2
-I/usr/include/tcl -ISource/Common -I../Source/Common
-I../Source/DataStructureAndEncodingDefinition
-I../Source/MediaStorageAndFileFormat -I../Source/DataDictionary
-I../Utilities/VTK -I/usr/lib/jvm/java-8-openjdk-amd64/include
-I/usr/lib/jvm/java-8-openjdk-amd64/include/linux -g -O2
-fdebug-prefix-map=/build/gdcm-2.8.6=. -fstack-protector-strong -Wformat
-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT
Utilities/VTK/CMakeFiles/vtkgdcmsharpglue.dir/vtkgdcmCSHARP_wrap.cxx.o -MF
Utilities/VTK/CMakeFiles/vtkgdcmsharpglue.dir/vtkgdcmCSHARP_wrap.cxx.o.d -o
Utilities/VTK/CMakeFiles/vtkgdcmsharpglue.dir/vtkgdcmCSHARP_wrap.cxx.o -c
Utilities/VTK/vtkgdcmCSHARP_wrap.cxx
ninja: build stopped: subcommand failed.
dh_auto_build: cd obj-x86_64-linux-gnu && LC_ALL=C.UTF-8 ninja -j4 -v returned
exit code 1
make[1]: *** [debian/rules:107: override_dh_auto_build-arch] Error 1
make[1]: Leaving directory '/build/gdcm-2.8.6'
make: *** [debian/rules:49: build] Error 2
andreas
gdcm_2.8.6-2exp1python3.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: gdcm
Source-Version: 2.8.6-3
We believe that the bug you reported is fixed in the latest version of
gdcm, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Gert Wollny <[email protected]> (supplier of updated gdcm package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Tue, 19 Jun 2018 23:58:51 +0200
Source: gdcm
Binary: libgdcm2.8 libgdcm-tools libgdcm2-dev libgdcm-cil python-gdcm
libvtkgdcm2.8 libvtkgdcm2-dev libvtkgdcm-cil python-vtkgdcm libvtkgdcm-tools
gdcm-doc libgdcm-java libvtkgdcm-java
Architecture: source
Version: 2.8.6-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Gert Wollny <[email protected]>
Description:
gdcm-doc - Grassroots DICOM documentation
libgdcm-cil - Grassroots DICOM CLI bindings
libgdcm-java - Grassroots DICOM Java bindings
libgdcm-tools - Grassroots DICOM tools and utilities
libgdcm2-dev - Grassroots DICOM development libraries and headers
libgdcm2.8 - Grassroots DICOM runtime libraries
libvtkgdcm-cil - Grassroots DICOM VTK CLI bindings
libvtkgdcm-java - Grassroots DICOM VTK Java bindings
libvtkgdcm-tools - Grassroots DICOM VTK tools and utilities
libvtkgdcm2-dev - Grassroots DICOM VTK development libraries and headers
libvtkgdcm2.8 - Grassroots DICOM VTK runtime libraries
python-gdcm - Grassroots DICOM Python bindings
python-vtkgdcm - Grassroots DICOM VTK/Python bindings
Closes: 901519
Changes:
gdcm (2.8.6-3) unstable; urgency=medium
.
* d/p/gdcm-fix-xslt-maxdepth.patch set maxdeph Closes: #901519
* d/control: remove useless python version field
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