Your message dated Fri, 19 Oct 2018 06:35:00 +0000 with message-id <[email protected]> and subject line Bug#905386: fixed in libedlib 1.2.3-2 has caused the Debian Bug report #905386, regarding libedlib: FTBFS in sid to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 905386: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=905386 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: src:libedlib Version: 1.2.3-1 Severity: serious Tags: ftbfs Hello Andreas. I tried to build this package in sid but it failed: -------------------------------------------------------------------------------- [...] debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<<PKGBUILDDIR>>' dh_auto_configure -- -DCMAKE_BUILD_TYPE=Release cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_BUILD_TYPE=Release .. -- The CXX compiler identification is GNU 8.2.0 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features [... snipped ...] file-rename 's/_static\.a/.a/' `find debian -name libedlib_static.a` d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*.so Library package automatic movement utility set -e install -d -m 755 debian/libedlib-dev/usr/lib/x86_64-linux-gnu install -d -m 755 debian/libedlib0/usr/lib/x86_64-linux-gnu mv debian/tmp/usr/lib/libedlib.a debian/libedlib-dev/usr/lib/x86_64-linux-gnu mv debian/tmp/usr/lib/libedlib.so debian/libedlib-dev/usr/lib/x86_64-linux-gnu mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libedlib.so.0 debian/libedlib0/usr/lib/x86_64-linux-gnu mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libedlib.so.1.2.3 debian/libedlib0/usr/lib/x86_64-linux-gnu PKGDEV=libedlib-dev PKGSHL=libedlib0 install -d -m 755 debian/libedlib-dev/usr/include mv debian/tmp/usr/include/edlib.h debian/libedlib-dev/usr/include make[1]: Leaving directory '/<<PKGBUILDDIR>>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see diff output below dpkg-gensymbols: warning: some symbols or patterns disappeared in the symbols file: see diff output below dpkg-gensymbols: warning: debian/libedlib0/DEBIAN/symbols doesn't match completely debian/libedlib0.symbols --- debian/libedlib0.symbols (libedlib0_1.2.3-1_amd64) +++ dpkg-gensymbolsd4Wcuf 2018-08-03 21:20:30.459354753 +0000 @@ -2,7 +2,8 @@ _ZN18EqualityDefinitionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEPK17EdlibEqualityPairi@Base 1.2.3 _ZN18EqualityDefinitionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEPK17EdlibEqualityPairi@Base 1.2.3 _ZNSt6vectorIcSaIcEE12emplace_backIJcEEEvDpOT_@Base 1.2.3 - _ZNSt6vectorIiSaIiEE12emplace_backIJiEEEvDpOT_@Base 1.2.3 +#MISSING: 1.2.3-1# _ZNSt6vectorIiSaIiEE12emplace_backIJiEEEvDpOT_@Base 1.2.3 + _ZNSt6vectorIiSaIiEE17_M_realloc_insertIJiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base 1.2.3-1 edlibAlign@Base 1.2.3 edlibAlignmentToCigar@Base 1.2.3 edlibDefaultAlignConfig@Base 1.2.3 dh_makeshlibs: failing due to earlier errors make: *** [debian/rules:10: binary-arch] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- The build was made with "dpkg-buildpackage -B" in my autobuilder, but it also fails here: https://buildd.debian.org/status/package.php?p=libedlib Thanks.
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--- Begin Message ---Source: libedlib Source-Version: 1.2.3-2 We believe that the bug you reported is fixed in the latest version of libedlib, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <[email protected]> (supplier of updated libedlib package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 19 Oct 2018 08:15:14 +0200 Source: libedlib Binary: libedlib0 libedlib-dev edlib-aligner Architecture: source Version: 1.2.3-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Andreas Tille <[email protected]> Description: edlib-aligner - edlib sequence alignment tool using edit distance libedlib-dev - library for sequence alignment using edit distance (devel) libedlib0 - library for sequence alignment using edit distance Closes: 905386 Changes: libedlib (1.2.3-2) unstable; urgency=medium . * Fix symbols file Closes: #905386 * Standards-Version: 4.2.1 * Run build time tests * Add autopkgtest Checksums-Sha1: 354e18e29db5cb97e60d2c64d32923cb46036c50 2108 libedlib_1.2.3-2.dsc 5da988fb72d3146441a804077a1ae204c1a20337 4912 libedlib_1.2.3-2.debian.tar.xz Checksums-Sha256: f5ab8ab7846e0b4f5d304e13dfa62fddc4fd168c878af297bdc83613942e3617 2108 libedlib_1.2.3-2.dsc c41d476087a0684e06ab7fb15a42dbd0d9fbaea61b4666d3a4ce622ce99f9dc0 4912 libedlib_1.2.3-2.debian.tar.xz Files: 85b62441a49743e74060f5e683d8caae 2108 science optional libedlib_1.2.3-2.dsc 6b67fb444898d47054c862ed981a9bdc 4912 science optional libedlib_1.2.3-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlvJd/8RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGyUA//bv/iwoShcNFvXr6uVVJc8FzGykz3S19S 6BV6vj2Pv8Cx90OfcQLPgqA5Ca0QpSn5EiXgeWr/Q1/2sZq86Qtp/0fKyrYBWFOD Mz3BGoBoB5PK/25sfyuBI0JVeLuHL7fcfYeg9v6S2vi/KLcr2R4rbbsVnG9N89uL m7Q+Y0cB/MIQT+FnTyyuk+R5IdI4FL/lE37/GZaUac+om/xho3n0Il5QmpQliOG8 HoW14mAoWu2ja10IPrQ294Nmcm7r0+kR/z81kumFcVLdEWNRQ3q6hoWKZ4IudB1l quY7obYx/5An/5UOfJ76HOS7dhEnk25dXqsz+N0zWRfJVHy9FRgdWYn4K5F7igqN 8DiGZldySnASJu/qxfFtT3e842S9Zk7W+0yZ6BQT+gDwKs/OXDn4X2JpOV+DFR88 gPi0Id1z/QBTDsqCg3dy/rszRNnzijTbFS/CXtz1gwUJnvfH+9T7xn7w3xGoA1Ba psO4+NZt8hjqWdAgMUb5APnAk0cGYUq+GIkbkLhVZLRXj1f5m8zeRWXXSFhPF7Z3 H9MTXG5n7KqOiFLuZdz9zUenjoVJxxi4BcTxQmG+VKCnbbHOs6L4JMPRzPXHPLNs z9SQPRxxa3zk/fOurc6jmOm4zM3JhA0+D/fuwBBZEa7RyXY2NBH+zkrG0g9RuYq9 3tto8bJ599A= =+IoC -----END PGP SIGNATURE-----
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