Your message dated Mon, 12 Nov 2018 15:49:23 +0000
with message-id <e1gmesp-0002ep...@fasolo.debian.org>
and subject line Bug#912643: fixed in biojava-live 1:1.7.1-8
has caused the Debian Bug report #912643,
regarding biojava-live FTBFS with OpenJDK 11
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
912643: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=912643
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: biojava-live
Version: 1:1.7.1-7
Severity: serious
Tags: ftbfs
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/biojava-live.html
...
compile-biojava:
[javac] /build/1st/biojava-live-1.7.1/build.xml:246: warning:
'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to
false for repeatable builds
[javac] Using javac -source 1.5 is no longer supported, switching to 6
[javac] Using javac -target 1.5 is no longer supported, switching to 6
[javac] Compiling 1444 source files to
/build/1st/biojava-live-1.7.1/ant-build/classes/biojava
[javac] warning: [options] bootstrap class path not set in conjunction with
-source 6
[javac] warning: [options] source value 6 is obsolete and will be removed
in a future release
[javac] warning: [options] target value 1.6 is obsolete and will be removed
in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use
-Xlint:-options.
[javac]
/build/1st/biojava-live-1.7.1/src/org/biojava/bio/proteomics/StructureTools.java:37:
warning: as of release 9, '_' is a keyword, and may not be used as an
identifier
[javac] private static final AtomicSymbol _;
[javac] ^
[javac]
/build/1st/biojava-live-1.7.1/src/org/biojava/bio/proteomics/StructureTools.java:53:
warning: as of release 9, '_' is a keyword, and may not be used as an
identifier
[javac] _ = (AtomicSymbol) sTok.parseToken(" ");
[javac] ^
[javac]
/build/1st/biojava-live-1.7.1/src/org/biojava/bio/proteomics/StructureTools.java:72:
warning: as of release 9, '_' is a keyword, and may not be used as an
identifier
[javac] return _;
[javac] ^
[javac]
/build/1st/biojava-live-1.7.1/src/org/biojava/bio/structure/PDBHeader.java:10:
error: package com.sun.corba.se.spi.legacy.connection does not exist
[javac] import
com.sun.corba.se.spi.legacy.connection.GetEndPointInfoAgainException;
[javac] ^
[javac] Note: Some input files use or override a deprecated API.
[javac] Note: Recompile with -Xlint:deprecation for details.
[javac] Note: Some input files use unchecked or unsafe operations.
[javac] Note: Recompile with -Xlint:unchecked for details.
[javac] 1 error
[javac] 7 warnings
--- End Message ---
--- Begin Message ---
Source: biojava-live
Source-Version: 1:1.7.1-8
We believe that the bug you reported is fixed in the latest version of
biojava-live, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 912...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated biojava-live package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 01 Nov 2018 07:10:52 +0100
Source: biojava-live
Binary: libbiojava1.7-java libbiojava-java libbiojava-java-demos
libbiojava-java-doc
Architecture: source all
Version: 1:1.7.1-8
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
libbiojava-java - Java API to biological data and applications (default
version)
libbiojava-java-demos - Example programs for BioJava
libbiojava-java-doc - [Biology] Documentation for BioJava
libbiojava1.7-java - Java API to biological data and applications (version 1.7)
Closes: 912643
Changes:
biojava-live (1:1.7.1-8) unstable; urgency=medium
.
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
* Remove trailing whitespace in debian/changelog
* Remove trailing whitespace in debian/rules
* Set release to 8 since CORBA classes are removed in Java 11, and no
replacement available in Debian (Closes: #912643)
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biojava-live_1.7.1-8_amd64.buildinfo
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libbiojava-java-demos_1.7.1-8_all.deb
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libbiojava-java_1.7.1-8_all.deb
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libbiojava1.7-java_1.7.1-8_all.deb
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--- End Message ---