Your message dated Wed, 05 Dec 2018 12:06:23 +0000
with message-id <[email protected]>
and subject line Bug#913064: fixed in python-biopython 1.72+dfsg-2
has caused the Debian Bug report #913064,
regarding python-biopython fails its autopkg tests
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
913064: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=913064
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:python-biopython
Version: 1.72+dfsg-1
Severity: important
Tags: sid buster
X-Debbugs-CC: [email protected]
User: [email protected]
Usertags: breaks needs-update
io.SVDSuperimposer docstring test ... ok
======================================================================
FAIL: test_partial_diagram (test_GenomeDiagram.DiagramTest)
Construct and draw SVG and PDF for just part of a SeqRecord.
----------------------------------------------------------------------
Traceback (most recent call last):
File
"/tmp/autopkgtest-lxc.7cadrw6s/downtmp/autopkgtest_tmp/Tests/test_GenomeDiagram.py",
line 770, in test_partial_diagram
== gdd.write_to_string('PDF').replace(b"\r\n", b"\n")
AssertionError
----------------------------------------------------------------------
Skipping any tests requiring internet access
Python version: 2.7.15+ (default, Aug 31 2018, 11:56:52)
[GCC 8.2.0]
Operating system: posix linux2
Ran 271 tests in 154.937 seconds
FAILED (failures = 1)
autopkgtest [21:26:22]: test run-unit-test: -----------------------]
autopkgtest [21:26:22]: test run-unit-test: - - - - - - - - - - results - - - -
- - - - - -
run-unit-test FAIL non-zero exit status 1
autopkgtest [21:26:23]: @@@@@@@@@@@@@@@@@@@@ summary
run-unit-test FAIL non-zero exit status 1
--- End Message ---
--- Begin Message ---
Source: python-biopython
Source-Version: 1.72+dfsg-2
We believe that the bug you reported is fixed in the latest version of
python-biopython, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Graham Inggs <[email protected]> (supplier of updated python-biopython package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
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Hash: SHA512
Format: 1.8
Date: Wed, 05 Dec 2018 11:41:01 +0000
Source: python-biopython
Binary: python-biopython python3-biopython python-biopython-doc
python-biopython-sql python3-biopython-sql
Architecture: source
Version: 1.72+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Graham Inggs <[email protected]>
Description:
python-biopython - Python library for bioinformatics (implemented in Python 2)
python-biopython-doc - Documentation for the Biopython library
python-biopython-sql - Biopython support for the BioSQL database schema
(Python 2)
python3-biopython - Python library for bioinformatics (implemented in Python 3)
python3-biopython-sql - Biopython support for the BioSQL database schema
(Python 3)
Closes: 913064
Changes:
python-biopython (1.72+dfsg-2) unstable; urgency=medium
.
[ Andreas Tille ]
* Remove unneeded comment about samtools - which is not found by biopython
anyway
.
[ Graham Inggs ]
* Team upload
* Fix compatibility with ReportLab 3.5 (Closes: #913064)
* Clean up some trailing whitespace in debian/* files
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