Your message dated Mon, 04 Feb 2019 07:50:40 +0000
with message-id <e1gqz1c-0007hw...@fasolo.debian.org>
and subject line Bug#921315: fixed in samtools 1.9-3
has caused the Debian Bug report #921315,
regarding samtools: baseline violation on i386
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
921315: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=921315
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: samtools
Version: 1.9-2
Severity: serious
Tags: patch

SSE is not part of the i386 baseline, fix:

--- debian/rules.old    2019-02-03 20:43:51.747130097 +0000
+++ debian/rules        2019-02-03 20:44:04.383129977 +0000
@@ -5,7 +5,7 @@
 
 export DEB_BUILD_MAINT_OPTIONS=hardening=+all
 ifneq (,$(filter $(DEB_HOST_ARCH),i386 kfreebsd-i386 hurd-i386))
-  export DEB_CFLAGS_MAINT_APPEND=-msse -mfpmath=sse
+  export DEB_CFLAGS_MAINT_APPEND=-ffloat-store
 endif
 
 %:

--- End Message ---
--- Begin Message ---
Source: samtools
Source-Version: 1.9-3

We believe that the bug you reported is fixed in the latest version of
samtools, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 921...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated samtools package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Mon, 04 Feb 2019 08:08:28 +0100
Source: samtools
Binary: samtools samtools-test
Architecture: source
Version: 1.9-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
 samtools   - processing sequence alignments in SAM, BAM and CRAM formats
 samtools-test - test files for the samtools package
Closes: 921315
Changes:
 samtools (1.9-3) unstable; urgency=medium
 .
   * Do not force sse for i386
     Closes: #921315
   * debhelper 12
   * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
Checksums-Sha1:
 ee551b2c9a68e4f5f599997d36b1c7fe348afc13 2199 samtools_1.9-3.dsc
 0aadf35fdfdd1b71e063ec116a2a65e241cc63b5 20792 samtools_1.9-3.debian.tar.xz
Checksums-Sha256:
 9137e019d111f9d07f6fa0a8005734e66a33d3722cda2b1695d60f359f051cb0 2199 
samtools_1.9-3.dsc
 d8e3f03f89165933748e014af5ac11ccfd78eb7f6c14c8255221c59c11f79ef1 20792 
samtools_1.9-3.debian.tar.xz
Files:
 e53f0c63f7da80662887b01d71a3da41 2199 science optional samtools_1.9-3.dsc
 ae05401eaa5730aca503c0b0a6ee6347 20792 science optional 
samtools_1.9-3.debian.tar.xz

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