Your message dated Sun, 02 Jun 2019 13:33:36 +0000
with message-id <[email protected]>
and subject line Bug#929791: fixed in ghmm 0.9~rc3-2
has caused the Debian Bug report #929791,
regarding ghmm: please make the build reproducible
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
929791: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=929791
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: ghmm
Version: 0.9~rc3-1
Severity: wishlist
Tags: patch
User: [email protected]
Usertags: environment
X-Debbugs-Cc: [email protected]

Hi,

Whilst working on the Reproducible Builds effort [0], we noticed
that ghmm could not be built reproducibly.

This is because it includes the CFLAGS used to build the package
in the "ghmm-config" binary which then include the absolute build
path via (eg.) the -ffile-prefix-map flag.

Patch attached.

  [0] https://reproducible-builds.org/


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      [email protected] / chris-lamb.co.uk
       `-
diff --git a/debian/rules b/debian/rules
index 3f59a17..896a3d9 100755
--- a/debian/rules
+++ b/debian/rules
@@ -18,6 +18,8 @@ override_dh_install:
                    --movedev debian/tmp/usr/include usr \
                    debian/tmp/usr/lib/*/*.so
        cd $(CURDIR)/debian/ghmm/usr/bin/ && mv cluster ghmm-cluster
+       sed -i -e 's@ [^ ]*-f\(file\|debug\)-prefix-map=[^ ]*@@g' \
+               $(DESTDIR)/debian/ghmm/usr/bin/ghmm-config
        #echo "FIXME: The following files are not installed"
        #ls -l $(find . -name site-packages)
        # cd $(CURDIR)/debian/tmp/usr/lib/python2.7/ && mv site-packages 
dist-packages

--- End Message ---
--- Begin Message ---
Source: ghmm
Source-Version: 0.9~rc3-2

We believe that the bug you reported is fixed in the latest version of
ghmm, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated ghmm package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Sun, 02 Jun 2019 15:13:30 +0200
Source: ghmm
Binary: ghmm libghmm-dev libghmm1
Architecture: source
Version: 0.9~rc3-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
 ghmm       - General Hidden-Markov-Model library - tools
 libghmm-dev - General Hidden-Markov-Model library - header files
 libghmm1   - General Hidden-Markov-Model library
Closes: 929791
Changes:
 ghmm (0.9~rc3-2) unstable; urgency=medium
 .
   [ Chris Lamb ]
   * Enable reproducible build by removing absolute build path from ghmm-config
     Closes: #929791
 .
   [ Andreas Tille ]
   * Standards-Version: 4.3.0
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ghmm_0.9~rc3-2.debian.tar.xz
Files:
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