Your message dated Tue, 6 Aug 2019 21:26:28 +0200
with message-id
<CAM8zJQv+=hgmmm-wfau5o8zdyuyyktgkkxnaxwe-qcazqvo...@mail.gmail.com>
and subject line deal.ii: FTBFS on s390x: p4est.debug test fails
has caused the Debian Bug report #919370,
regarding deal.ii: FTBFS on s390x: p4est.debug test fails
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
919370: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=919370
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: deal.ii
Version: 9.0.1-1
Severity: serious
Tags: ftbfs
Hi Maintainer
Recent rebuilds of deal.ii on s390x have been failing with the following
errors:
Test project /<<PKGBUILDDIR>>/obj-s390x-linux-gnu/tests/quick_tests
Start 1: step.debug
1/19 Test #1: step.debug ....................... Passed 21.48 sec
Start 2: step.release
2/19 Test #2: step.release ..................... Passed 19.35 sec
Start 3: affinity.debug
3/19 Test #3: affinity.debug ................... Passed 8.94 sec
Start 4: mpi.debug
4/19 Test #4: mpi.debug ........................ Passed 9.87 sec
Start 5: tbb.debug
5/19 Test #5: tbb.debug ........................ Passed 8.52 sec
Start 6: p4est.debug
6/19 Test #6: p4est.debug ......................***Failed 11.98 sec
...
p4est.debug: RUN failed. Output:
[zani:21379] *** Process received signal ***
[zani:21379] Signal: Segmentation fault (11)
[zani:21379] Signal code: Address not mapped (1)
[zani:21379] Failing at address: 0x3ff74000000
[zani:21379] [ 0] [0x3ffcf1fc300]
[zani:21379] [ 1]
/usr/lib/s390x-linux-gnu/pmix/lib/pmix/mca_gds_ds21.so(+0x20c8)[0x3ff6fe020c8]
[zani:21379] [ 2]
/usr/lib/s390x-linux-gnu/libmca_common_dstore.so.1(pmix_common_dstor_init+0x9f8)[0x3ff6fd0a570]
[zani:21379] [ 3]
/usr/lib/s390x-linux-gnu/pmix/lib/pmix/mca_gds_ds21.so(+0x1d44)[0x3ff6fe01d44]
[zani:21379] [ 4]
/usr/lib/s390x-linux-gnu/libpmix.so.2(pmix_gds_base_select+0x124)[0x3ff742d8f34]
[zani:21379] [ 5]
/usr/lib/s390x-linux-gnu/libpmix.so.2(pmix_rte_init+0x626)[0x3ff7428e73e]
[zani:21379] [ 6]
/usr/lib/s390x-linux-gnu/libpmix.so.2(PMIx_Init+0xfa)[0x3ff7424aafa]
[zani:21379] [ 7]
/usr/lib/s390x-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext2x.so(ext2x_client_init+0xe2)[0x3ff7440c152]
[zani:21379] [ 8]
/usr/lib/s390x-linux-gnu/openmpi/lib/openmpi3/mca_ess_pmi.so(+0x1ccc)[0x3ff74d01ccc]
[zani:21379] [ 9]
/usr/lib/s390x-linux-gnu/libopen-rte.so.40(orte_init+0x2da)[0x3ff7bf1b962]
[zani:21379] [10]
/usr/lib/s390x-linux-gnu/libmpi.so.40(ompi_mpi_init+0x2fe)[0x3ff8494c3d6]
[zani:21379] [11]
/usr/lib/s390x-linux-gnu/libmpi.so.40(PMPI_Init_thread+0x6c)[0x3ff8497b214]
[zani:21379] [12]
/<<PKGBUILDDIR>>/obj-s390x-linux-gnu/lib/s390x-linux-gnu/libdeal.ii.g.so.9.0.1(_ZN6dealii9Utilities3MPI16MPI_InitFinalizeC2ERiRPPcj+0x82)[0x3ff8cb4cae2]
[zani:21379] [13] ./p4est.debug(main+0x40)[0x11a2a37b0]
[zani:21379] [14]
/lib/s390x-linux-gnu/libc.so.6(__libc_start_main+0x10e)[0x3ff84524176]
[zani:21379] [15] ./p4est.debug(+0x23614)[0x11a2a3614]
[zani:21379] [16] [0x0]
[zani:21379] *** End of error message ***
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
[zani:21385] *** Process received signal ***
[zani:21385] Signal: Segmentation fault (11)
[zani:21385] Signal code: Address not mapped (1)
[zani:21385] Failing at address: 0x3ff8c000000
[zani:21385] [ 0] [0x3ffebd7c180]
[zani:21385] [ 1]
/usr/lib/s390x-linux-gnu/pmix/lib/pmix/mca_gds_ds21.so(+0x20c8)[0x3ff8c0820c8]
[zani:21385] [ 2]
/usr/lib/s390x-linux-gnu/libmca_common_dstore.so.1(pmix_common_dstor_init+0x9f8)[0x3ff87f0a570]
[zani:21385] [ 3]
/usr/lib/s390x-linux-gnu/pmix/lib/pmix/mca_gds_ds21.so(+0x1d44)[0x3ff8c081d44]
[zani:21385] [ 4]
/usr/lib/s390x-linux-gnu/libpmix.so.2(pmix_gds_base_select+0x124)[0x3ff8c4d8f34]
[zani:21385] [ 5]
/usr/lib/s390x-linux-gnu/libpmix.so.2(pmix_rte_init+0x626)[0x3ff8c48e73e]
[zani:21385] [ 6]
/usr/lib/s390x-linux-gnu/libpmix.so.2(PMIx_Init+0xfa)[0x3ff8c44aafa]
[zani:21385] [ 7]
/usr/lib/s390x-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext2x.so(ext2x_client_init+0xe2)[0x3ff8c60c152]
[zani:21385] [ 8]
/usr/lib/s390x-linux-gnu/openmpi/lib/openmpi3/mca_ess_pmi.so(+0x1ccc)[0x3ff8cf01ccc]
[zani:21385] [ 9]
/usr/lib/s390x-linux-gnu/libopen-rte.so.40(orte_init+0x2da)[0x3ff9411b962]
[zani:21385] [10]
/usr/lib/s390x-linux-gnu/libmpi.so.40(ompi_mpi_init+0x2fe)[0x3ff9cb4c3d6]
[zani:21385] [11]
/usr/lib/s390x-linux-gnu/libmpi.so.40(PMPI_Init_thread+0x6c)[0x3ff9cb7b214]
[zani:21385] [12]
/<<PKGBUILDDIR>>/obj-s390x-linux-gnu/lib/s390x-linux-gnu/libdeal.ii.g.so.9.0.1(_ZN6dealii9Utilities3MPI16MPI_InitFinalizeC2ERiRPPcj+0x82)[0x3ffa4d4cae2]
[zani:21385] [13] ./p4est.debug(main+0x40)[0x10ea237b0]
[zani:21385] [14]
/lib/s390x-linux-gnu/libc.so.6(__libc_start_main+0x10e)[0x3ff9c724176]
[zani:21385] [15] ./p4est.debug(+0x23614)[0x10ea23614]
[zani:21385] [16] [0x0]
[zani:21385] *** End of error message ***
[zani:21386] *** Process received signal ***
[zani:21386] Signal: Segmentation fault (11)
[zani:21386] Signal code: Address not mapped (1)
[zani:21386] Failing at address: 0x3ff70000000
[zani:21386] [ 0] [0x3ffe8bfada0]
[zani:21386] [ 1]
/usr/lib/s390x-linux-gnu/pmix/lib/pmix/mca_gds_ds21.so(+0x20c8)[0x3ff6be820c8]
[zani:21386] [ 2]
/usr/lib/s390x-linux-gnu/libmca_common_dstore.so.1(pmix_common_dstor_init+0x9f8)[0x3ff6bd8a570]
[zani:21386] [ 3]
/usr/lib/s390x-linux-gnu/pmix/lib/pmix/mca_gds_ds21.so(+0x1d44)[0x3ff6be81d44]
[zani:21386] [ 4]
/usr/lib/s390x-linux-gnu/libpmix.so.2(pmix_gds_base_select+0x124)[0x3ff70358f34]
[zani:21386] [ 5]
/usr/lib/s390x-linux-gnu/libpmix.so.2(pmix_rte_init+0x626)[0x3ff7030e73e]
[zani:21386] [ 6]
/usr/lib/s390x-linux-gnu/libpmix.so.2(PMIx_Init+0xfa)[0x3ff702caafa]
[zani:21386] [ 7]
/usr/lib/s390x-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext2x.so(ext2x_client_init+0xe2)[0x3ff7048c152]
[zani:21386] [ 8]
/usr/lib/s390x-linux-gnu/openmpi/lib/openmpi3/mca_ess_pmi.so(+0x1ccc)[0x3ff70d81ccc]
[zani:21386] [ 9]
/usr/lib/s390x-linux-gnu/libopen-rte.so.40(orte_init+0x2da)[0x3ff77f9b962]
[zani:21386] [10]
/usr/lib/s390x-linux-gnu/libmpi.so.40(ompi_mpi_init+0x2fe)[0x3ff809cc3d6]
[zani:21386] [11]
/usr/lib/s390x-linux-gnu/libmpi.so.40(PMPI_Init_thread+0x6c)[0x3ff809fb214]
[zani:21386] [12]
/<<PKGBUILDDIR>>/obj-s390x-linux-gnu/lib/s390x-linux-gnu/libdeal.ii.g.so.9.0.1(_ZN6dealii9Utilities3MPI16MPI_InitFinalizeC2ERiRPPcj+0x82)[0x3ff88bccae2]
[zani:21386] [13] ./p4est.debug(main+0x40)[0x138a237b0]
[zani:21386] [14]
/lib/s390x-linux-gnu/libc.so.6(__libc_start_main+0x10e)[0x3ff805a4176]
[zani:21386] [15] ./p4est.debug(+0x23614)[0x138a23614]
[zani:21386] [16] [0x0]
[zani:21386] *** End of error message ***
[zani:21383] *** Process received signal ***
[zani:21383] Signal: Segmentation fault (11)
[zani:21383] Signal code: Address not mapped (1)
[zani:21383] Failing at address: 0x3ff68000000
[zani:21383] [ 0] [0x3fff0b7ba60]
[zani:21383] [ 1]
/usr/lib/s390x-linux-gnu/pmix/lib/pmix/mca_gds_ds21.so(+0x20c8)[0x3ff63c020c8]
[zani:21383] [ 2]
/usr/lib/s390x-linux-gnu/libmca_common_dstore.so.1(pmix_common_dstor_init+0x9f8)[0x3ff63b0a570]
[zani:21383] [ 3]
/usr/lib/s390x-linux-gnu/pmix/lib/pmix/mca_gds_ds21.so(+0x1d44)[0x3ff63c01d44]
[zani:21383] [ 4]
/usr/lib/s390x-linux-gnu/libpmix.so.2(pmix_gds_base_select+0x124)[0x3ff63f58f34]
[zani:21383] [ 5]
/usr/lib/s390x-linux-gnu/libpmix.so.2(pmix_rte_init+0x626)[0x3ff63f0e73e]
[zani:21383] [ 6]
/usr/lib/s390x-linux-gnu/libpmix.so.2(PMIx_Init+0xfa)[0x3ff63ecaafa]
[zani:21383] [ 7]
/usr/lib/s390x-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext2x.so(ext2x_client_init+0xe2)[0x3ff6820c152]
[zani:21383] [ 8]
/usr/lib/s390x-linux-gnu/openmpi/lib/openmpi3/mca_ess_pmi.so(+0x1ccc)[0x3ff68b01ccc]
[zani:21383] [ 9]
/usr/lib/s390x-linux-gnu/libopen-rte.so.40(orte_init+0x2da)[0x3ff6fd1b962]
[zani:21383] [10]
/usr/lib/s390x-linux-gnu/libmpi.so.40(ompi_mpi_init+0x2fe)[0x3ff7874c3d6]
[zani:21383] [11]
/usr/lib/s390x-linux-gnu/libmpi.so.40(PMPI_Init_thread+0x6c)[0x3ff7877b214]
[zani:21383] [12]
/<<PKGBUILDDIR>>/obj-s390x-linux-gnu/lib/s390x-linux-gnu/libdeal.ii.g.so.9.0.1(_ZN6dealii9Utilities3MPI16MPI_InitFinalizeC2ERiRPPcj+0x82)[0x3ff8094cae2]
[zani:21383] [13] ./p4est.debug(main+0x40)[0x1040237b0]
[zani:21383] [14]
/lib/s390x-linux-gnu/libc.so.6(__libc_start_main+0x10e)[0x3ff78324176]
[zani:21383] [15] ./p4est.debug(+0x23614)[0x104023614]
[zani:21383] [16] [0x0]
[zani:21383] *** End of error message ***
--------------------------------------------------------------------------
mpiexec noticed that process rank 1 with PID 0 on node zani exited on
signal 11 (Segmentation fault).
Regards
Graham
[1] https://buildd.debian.org/status/logs.php?pkg=deal.ii&arch=s390x
--- End Message ---
--- Begin Message ---
Built successfully on zandonai on 2019-03-09 18:32:43 [1].
[1]
https://buildd.debian.org/status/fetch.php?pkg=deal.ii&arch=s390x&ver=9.0.1-1%2Bb1&stamp=1552156363&raw=0
--- End Message ---
