Your message dated Tue, 2 Jun 2020 16:55:45 -0500
with message-id <[email protected]>
and subject line Re: Bug#747881: Upstream has the fix since long
has caused the Debian Bug report #747881,
regarding r-base: Error in linker flag causes rpy2 to FTBFS on GNU/Hurd
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
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--
747881: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=747881
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: r-base
Version: 3.1.0-1
Severity: important
Tags: patch
User: [email protected]
Usertags: hurd
Hi,
rpy2 FTBFS on GNU/Hurd, when compiling the build stops at
"/usr/lib/R/bin/R" CMD config --ldflags
Invalid substring
-export-dynamic
in string
-export-dynamic -fopenmp -L/usr/lib/R/lib -lR -lpcre -llzma -lbz2 -lz -lrt
-ldl -lm
This is caused by an error in a linker flag in the generated file
/etc/R/Makeconf of package r-base. The attached patch fixes this
problem by using the correct linker directive for variable main_ldflags
in configure.ac
Thanks!
--- a/configure.ac 2014-03-13 00:03:32.000000000 +0100
+++ b/configure.ac 2014-05-12 16:25:25.000000000 +0200
@@ -1413,7 +1413,7 @@
shlib_ldflags="-shared"
;;
gnu*) # GNU Hurd
- main_ldflags="-export-dynamic"
+ main_ldflags="-Wl,--export-dynamic"
;;
hpux*)
SHLIB_EXT=".sl"
--- End Message ---
--- Begin Message ---
On 2 November 2017 at 17:40, Julien Puydt wrote:
| Control: notfixed -1 3.1.1
| Control: fixed -1 3.3.3
|
| I checked from the .orig.tar.gz files that the upstream configure.ac had
| the problem in 3.1.1 (old stable) but is fixed in 3.3.3 (stable), so
| this bug is obsolete.
|
| Snark on #debian-science
(Very) belatedly marking this as done. Thanks for the check with 3.3.3.
Dirk
--
http://dirk.eddelbuettel.com | @eddelbuettel | [email protected]
--- End Message ---
