Your message dated Tue, 01 Sep 2020 15:23:07 +0000
with message-id <[email protected]>
and subject line Bug#933750: fixed in paleomix 1.3.0-1
has caused the Debian Bug report #933750,
regarding paleomix: Port to Python3 needed
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
933750: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=933750
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: paleomix
Severity: normal
The code needs to be ported to Python3.
-- System Information:
Debian Release: 10.0
APT prefers testing
APT policy: (501, 'testing'), (500, 'buildd-unstable'), (50, 'unstable'), (5,
'experimental'), (1, 'buildd-experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE,
TAINT_UNSIGNED_MODULE
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8), LANGUAGE=de_DE:de
(charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages paleomix depends on:
pn adapterremoval <none>
ii bcftools 1.9-1
ii bedtools 2.27.1+dfsg-4
pn bowtie2 <none>
ii bwa 0.7.17-3
pn examl <none>
ii mafft 7.407-2
pn mapdamage <none>
ii phylip 1:3.697+dfsg-1
pn picard-tools <none>
ii python 2.7.16-1
pn python-coverage <none>
pn python-flexmock <none>
ii python-pysam 0.15.2+ds-2
pn python-setproctitle <none>
ii r-base-core 3.5.2-1
pn radiant <none>
ii raxml 8.2.12+dfsg-1
ii samtools 1.9-4
paleomix recommends no packages.
paleomix suggests no packages.
--- End Message ---
--- Begin Message ---
Source: paleomix
Source-Version: 1.3.0-1
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
paleomix, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated paleomix package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Tue, 01 Sep 2020 16:48:06 +0200
Source: paleomix
Architecture: source
Version: 1.3.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 933750 937232
Changes:
paleomix (1.3.0-1) unstable; urgency=medium
.
[ Andreas Tille ]
* New upstream version
This version supports Python3
Closes: #937232, #933750
* Standards-Version: 4.5.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Upstream switched from nose to pytest
* Adjust (Build-)Depends
* Update debian/copyright
* Install README.rst as user documentation
* Renamed lintian tag
* Fix manpage
* Fix autopkgtest
* Forwarded patch upstream
.
[ Nilesh Patra ]
* Mark command test xfail which would xpass during autopkgtest
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