Your message dated Sun, 6 Dec 2020 19:42:19 +0530
with message-id <[email protected]>
and subject line Re: ngmlr: FTBFS on arm64: ConvexAlignFast.cpp:11:10: fatal
error: x86intrin.h: No such file or directory
has caused the Debian Bug report #976551,
regarding ngmlr: FTBFS on arm64: ConvexAlignFast.cpp:11:10: fatal error:
x86intrin.h: No such file or directory
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
976551: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=976551
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: ngmlr
Version: 0.2.7+dfsg-2
Severity: important
Justification: FTBFS on arm64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20201205 ftbfs-bullseye
Hi,
During a rebuild of all packages in sid, your package failed to build
on arm64.
Relevant part (hopefully):
> cd /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/src && /usr/bin/c++
> -I/usr/include/htslib -I/<<PKGBUILDDIR>>/src/../lib -g -O2
> -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
> -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o
> CMakeFiles/ngmlr.dir/ConvexAlignFast.cpp.o -c
> /<<PKGBUILDDIR>>/src/ConvexAlignFast.cpp
> /<<PKGBUILDDIR>>/src/ConvexAlignFast.cpp:11:10: fatal error: x86intrin.h: No
> such file or directory
> 11 | #include <x86intrin.h>
> | ^~~~~~~~~~~~~
> compilation terminated.
> make[3]: *** [src/CMakeFiles/ngmlr.dir/build.make:163:
> src/CMakeFiles/ngmlr.dir/ConvexAlignFast.cpp.o] Error 1
The full build log is available from:
http://qa-logs.debian.net/2020/12/05/ngmlr_0.2.7+dfsg-2_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with me
so that we can identify if something relevant changed in the meantime.
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Builds on arm64 now, log here[1]
[1]:
https://buildd.debian.org/status/fetch.php?pkg=ngmlr&arch=arm64&ver=0.2.7%2Bdfsg-4&stamp=1607262337&raw=0
signature.asc
Description: OpenPGP digital signature
--- End Message ---
