Your message dated Mon, 15 Mar 2021 10:50:45 +0000 with message-id <[email protected]> and subject line Bug#982699: fixed in intake 0.6.1-1 has caused the Debian Bug report #982699, regarding intake: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.9 returned exit code 13 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 982699: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=982699 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: intake Version: 0.6.0-4 Severity: serious Justification: FTBFS on amd64 Tags: bullseye sid ftbfs Usertags: ftbfs-20210213 ftbfs-bullseye Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[1]: Entering directory '/<<PKGBUILDDIR>>' > dh_install > # For some reason, not all data is movable via install or dh_install, so > # just force copy (and overwrite if needed) for pytest to actually work > for py in `py3versions -sv` ; do cp -a intake/source/tests > .pybuild/cpython3_${py}_intake/build/intake/source; done > PYBUILD_SYSTEM=custom \ > PYBUILD_TEST_ARGS='cd {build_dir}; > PATH=/<<PKGBUILDDIR>>/debian/{package}/usr/bin:/<<PKGBUILDDIR>>/debian/{package}/usr/lib:/<<PKGBUILDDIR>>/debian/{package}/build/intake:$PATH > {interpreter} -m pytest' \ > dh_auto_test --buildsystem=pybuild > I: pybuild base:232: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_intake/build; > PATH=/<<PKGBUILDDIR>>/debian/python3-intake/usr/bin:/<<PKGBUILDDIR>>/debian/python3-intake/usr/lib:/<<PKGBUILDDIR>>/debian/python3-intake/build/intake:$PATH > python3.9 -m pytest > ============================= test session starts > ============================== > platform linux -- Python 3.9.1+, pytest-6.0.2, py-1.10.0, pluggy-0.13.0 > rootdir: /<<PKGBUILDDIR>> > collected 371 items / 9 skipped / 362 selected > > intake/auth/tests/test_auth.py ...... [ > 1%] > intake/catalog/tests/test_alias.py .. [ > 2%] > intake/catalog/tests/test_auth_integration.py .. [ > 2%] > intake/catalog/tests/test_caching_integration.py .................. [ > 7%] > intake/catalog/tests/test_core.py . [ > 7%] > intake/catalog/tests/test_default.py . [ > 8%] > intake/catalog/tests/test_discovery.py . [ > 8%] > intake/catalog/tests/test_gui.py ..s..s [ > 9%] > intake/catalog/tests/test_local.py ..................................... [ > 19%] > ................................................. [ > 33%] > intake/catalog/tests/test_parameters.py ............ [ > 36%] > intake/catalog/tests/test_persist.py .s [ > 36%] > intake/catalog/tests/test_reload_integration.py .... [ > 38%] > intake/catalog/tests/test_remote_integration.py ........................ [ > 44%] > ... [ > 45%] > intake/catalog/tests/test_utils.py ....... [ > 47%] > intake/catalog/tests/test_zarr.py ... [ > 47%] > intake/cli/client/tests/test_cache.py ...... [ > 49%] > intake/cli/client/tests/test_conf.py ..... [ > 50%] > intake/cli/client/tests/test_local_integration.py ......... [ > 53%] > intake/cli/server/tests/test_serializer.py sss......... [ > 56%] > intake/cli/server/tests/test_server.py ......ss.. [ > 59%] > intake/cli/tests/test_util.py ........ [ > 61%] > intake/container/tests/test_generics.py . [ > 61%] > intake/container/tests/test_persist.py ...s [ > 62%] > intake/gui/tests/test_init_gui.py ..s [ > 63%] > intake/source/tests/test_base.py ................. [ > 68%] > intake/source/tests/test_cache.py ...............s [ > 72%] > intake/source/tests/test_csv.py ......FFF..s.. [ > 76%] > intake/source/tests/test_discovery.py ...... [ > 77%] > intake/source/tests/test_npy.py ........... [ > 80%] > intake/source/tests/test_text.py .................. [ > 85%] > intake/source/tests/test_utils.py ............................... [ > 94%] > intake/tests/test_config.py ........ [ > 96%] > intake/tests/test_top_level.py ......s. [ > 98%] > intake/tests/test_utils.py ...... > [100%] > > =================================== FAILURES > =================================== > ______________________________ test_read_pattern > _______________________________ > > sample_pattern_datasource = sources: > csv: > args: > urlpath: > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_intake/build/intake/source/tests/sample{num:d}_{dup:d}.csv > description: '' > driver: intake.source.csv.CSVSource > metadata: {} > > > def test_read_pattern(sample_pattern_datasource): > da = sample_pattern_datasource.to_dask() > assert set(da.num.cat.categories) == {2, 3} > assert set(da.dup.cat.categories) == {1, 2} > > check_read_pattern_output(sample_pattern_datasource) > > intake/source/tests/test_csv.py:156: > _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ > _ > > source = sources: > csv: > args: > urlpath: > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_intake/build/intake/source/tests/sample{num:d}_{dup:d}.csv > description: '' > driver: intake.source.csv.CSVSource > metadata: {} > > > def check_read_pattern_output(source): > da = source.to_dask() > assert da.num.cat.known is True > assert da.dup.cat.known is True > > # check that first partition has correct num and dup; which file > # it represents is not guaranteed > df0 = da.get_partition(0).compute() > if df0['name'][0].endswith('1'): > > assert all(df0.num == 2) > E assert False > E + where False = all(0 3\n1 3\n2 3\n3 3\nName: num, > dtype: category\nCategories (2, int64): [2, 3] == 2) > E + where 0 3\n1 3\n2 3\n3 3\nName: num, dtype: > category\nCategories (2, int64): [2, 3] = name score rank num dup\n0 > Alice1 100.5 1 3 2\n1 Bob1 50.3 2 3 2\n2 Charlie1 > 25.0 3 3 2\n3 Eve1 25.0 3 3 2.num > > intake/source/tests/test_csv.py:119: AssertionError > _________________________ test_read_pattern_with_cache > _________________________ > > sample_pattern_datasource_with_cache = sources: > csv: > args: > urlpath: > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_intake/build/intake/s... regex: > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_intake/build/intake/source/tests > type: file > > > def test_read_pattern_with_cache(sample_pattern_datasource_with_cache): > da = sample_pattern_datasource_with_cache.to_dask() > assert set(da.num.cat.categories) == {2, 3} > assert set(da.dup.cat.categories) == {1, 2} > > check_read_pattern_output(sample_pattern_datasource_with_cache) > > intake/source/tests/test_csv.py:163: > _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ > _ > > source = sources: > csv: > args: > urlpath: > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_intake/build/intake/s... regex: > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_intake/build/intake/source/tests > type: file > > > def check_read_pattern_output(source): > da = source.to_dask() > assert da.num.cat.known is True > assert da.dup.cat.known is True > > # check that first partition has correct num and dup; which file > # it represents is not guaranteed > df0 = da.get_partition(0).compute() > if df0['name'][0].endswith('1'): > assert all(df0.num == 2) > > assert all(df0.dup == 1) > E assert False > E + where False = all(0 2\n1 2\n2 2\n3 2\nName: dup, > dtype: category\nCategories (2, int64): [1, 2] == 1) > E + where 0 2\n1 2\n2 2\n3 2\nName: dup, dtype: > category\nCategories (2, int64): [1, 2] = name score rank num dup\n0 > Alice1 100.5 1 2 2\n1 Bob1 50.3 2 2 2\n2 Charlie1 > 25.0 3 2 2\n3 Eve1 25.0 3 2 2.dup > > intake/source/tests/test_csv.py:120: AssertionError > ----------------------------- Captured stderr call > ----------------------------- > > 0/|/sample2_2.csv: | > > 0/|/sample3_2.csv: |[A > > > 0/|/sample2_1.csv: |[A[A > > > > [A > > > [A[A > __________________ test_read_pattern_with_path_as_pattern_str > __________________ > > sample_list_datasource_with_path_as_pattern_str = sources: > csv: > args: > path_as_pattern: sample{num:d}_{dup:d}.csv > urlpath: > - /<<BUILDDIR>>...e/build/intake/source/tests/sample2_2.csv > description: '' > driver: intake.source.csv.CSVSource > metadata: {} > > > def > test_read_pattern_with_path_as_pattern_str(sample_list_datasource_with_path_as_pattern_str): > da = sample_list_datasource_with_path_as_pattern_str.to_dask() > assert set(da.num.cat.categories) == {2} > assert set(da.dup.cat.categories) == {1, 2} > > > > check_read_pattern_output(sample_list_datasource_with_path_as_pattern_str) > > intake/source/tests/test_csv.py:170: > _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ > _ > > source = sources: > csv: > args: > path_as_pattern: sample{num:d}_{dup:d}.csv > urlpath: > - /<<BUILDDIR>>...e/build/intake/source/tests/sample2_2.csv > description: '' > driver: intake.source.csv.CSVSource > metadata: {} > > > def check_read_pattern_output(source): > da = source.to_dask() > assert da.num.cat.known is True > assert da.dup.cat.known is True > > # check that first partition has correct num and dup; which file > # it represents is not guaranteed > df0 = da.get_partition(0).compute() > if df0['name'][0].endswith('1'): > assert all(df0.num == 2) > > assert all(df0.dup == 1) > E assert False > E + where False = all(0 2\n1 2\n2 2\n3 2\nName: dup, > dtype: category\nCategories (2, int64): [1, 2] == 1) > E + where 0 2\n1 2\n2 2\n3 2\nName: dup, dtype: > category\nCategories (2, int64): [1, 2] = name score rank num dup\n0 > Alice1 100.5 1 2 2\n1 Bob1 50.3 2 2 2\n2 Charlie1 > 25.0 3 2 2\n3 Eve1 25.0 3 2 2.dup > > intake/source/tests/test_csv.py:120: AssertionError > =========================== short test summary info > ============================ > FAILED intake/source/tests/test_csv.py::test_read_pattern - assert False > FAILED intake/source/tests/test_csv.py::test_read_pattern_with_cache - > assert... > FAILED > intake/source/tests/test_csv.py::test_read_pattern_with_path_as_pattern_str > ================== 3 failed, 355 passed, 22 skipped in 50.61s > ================== > E: pybuild pybuild:353: test: plugin custom failed with: exit code=1: cd > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_intake/build; > PATH=/<<PKGBUILDDIR>>/debian/python3-intake/usr/bin:/<<PKGBUILDDIR>>/debian/python3-intake/usr/lib:/<<PKGBUILDDIR>>/debian/python3-intake/build/intake:$PATH > python3.9 -m pytest > dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.9 > returned exit code 13 The full build log is available from: http://qa-logs.debian.net/2021/02/13/intake_0.6.0-4_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please marking it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with me so that we can identify if something relevant changed in the meantime. About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---Source: intake Source-Version: 0.6.1-1 Done: Michael R. Crusoe <[email protected]> We believe that the bug you reported is fixed in the latest version of intake, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Michael R. Crusoe <[email protected]> (supplier of updated intake package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Mon, 15 Mar 2021 11:26:46 +0100 Source: intake Architecture: source Version: 0.6.1-1 Distribution: unstable Urgency: high Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Michael R. Crusoe <[email protected]> Closes: 982699 Changes: intake (0.6.1-1) unstable; urgency=high . * Team upload. * New upstream version, Closes: #982699 * Standards-Version: 4.5.1 (routine-update) * Remove trailing whitespace in debian/changelog (routine-update) * Refresh patches * Add ${sphinxdoc:Built-Using} for the -doc package Checksums-Sha1: fb21a6cb0bd23d0d67c7c1658af01c2bb62db5fb 2450 intake_0.6.1-1.dsc 4b36abc9802faf09cb8981c002929258aada9e17 4435437 intake_0.6.1.orig.tar.gz da76ceeb52409e41a9966c5cda705dc73b309412 10436 intake_0.6.1-1.debian.tar.xz 4aeac5d1c5f7811ab10f8f9dbf802624f3b4cfed 8253 intake_0.6.1-1_source.buildinfo Checksums-Sha256: b1691d64e965ef330868aaa28fb4543aa4953dc9506e7f753fe17fb1bf13580b 2450 intake_0.6.1-1.dsc 88388d9defa76dc98e06c80059a0aad12268c583321a136e920323047aea3a0d 4435437 intake_0.6.1.orig.tar.gz 66e5d4c58abadd05c5d7822127418648c9c52c0c3c84baf2b65a74069ba40624 10436 intake_0.6.1-1.debian.tar.xz 396b8f1e34b5119d931d9bf394256f6cf638e812f41fb47887030363c8d9dffc 8253 intake_0.6.1-1_source.buildinfo Files: ceb6d73348e1bf44f84fc8053b948799 2450 science optional intake_0.6.1-1.dsc 15c21dbdc5003cd27fe5112024163011 4435437 science optional intake_0.6.1.orig.tar.gz 907a0a5b490ca17b88a3c83a0d7ec4aa 10436 science optional intake_0.6.1-1.debian.tar.xz c09e4d8f91d7b1d6dfcb7713251e9ba6 8253 science optional intake_0.6.1-1_source.buildinfo -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmBPNp4ACgkQPCZ2P2xn 5uLScg/9EBOMgEUJFI+LGM/pLh5aFQhtS44Y9mDzmwRfk9WoeGv1OffM3P3ianx+ xNYHgMB3vqhMBSiM4WeSlXWbwOZx+5X5YVK0PkCzyjvktrJ6Y8OxJpUxn0hTMUjw P0pSe/VfGF1R9KAN1BOP36hfrCDNiZjT01cYv5LFE4nw9vEI91Z/qTm5GaGuw2Om aJydGOTLpqfTNO/By4uJPOyAJROHP401ecuNe6b47wsz0wNeWQMG8UYPoueWDDUK D1voqRSbyQRuOjDpMaF7unbFbiEoKsLDukvLi14D152BcOURbemmyS7am3bTo/N6 6KQ/G021FnDfOzeEC70E6SWt0OMqGdarvj0k83YKXFytdNqNEhud/T8NZJody5Gt qzCsz3TWw+Wj/jq59vSdOprMcXZ+/TpGS6wNugzmGgFxeOkSvnobdqYRKfvzXTQN 4ZFfe+005TdUSAORdEFf5EUh5pu/TKXtFmPSGou6jaet0235WlMcwaCtzQlmLuUl Bg/MuHU7uQ8dhAF5URY4qs7H8jlqewKoKJWeBH37VG5EogF7VhNmh35wMOilSj2P e62uzMpV1Im5EjW3PNx1SbZy5wDY6+Czai71WOnhtJMLUMIbq2lU1/5hXFF+NShD WVj+znVxbJgawcDhTgUYV9kd1AEZVxyaXc3kdCcxlvqiXtaOZSk= =PqhU -----END PGP SIGNATURE-----
--- End Message ---
