Your message dated Wed, 18 Aug 2021 07:04:58 +0000
with message-id <[email protected]>
and subject line Bug#992270: fixed in rna-star 2.7.9a+dfsg-2
has caused the Debian Bug report #992270,
regarding rna-star FTBFS on !amd64: unrecognized command-line option ‘-mavx2’
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
992270: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=992270
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: rna-star
Version: 2.7.9a+dfsg-1
Severity: serious
Tags: ftbfs
https://buildd.debian.org/status/package.php?p=rna-star&suite=sid
...
g++ -c -I./ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -std=c++11 -fopenmp
-D'COMPILATION_TIME_PLACE="2021-08-15T17:48:21+00:00 <place not set in Debian
package>"' -flto -flto -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -Wformat -Werror=format-security -O3 -Wdate-time
-D_FORTIFY_SOURCE=2 -std=c++0x -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -Wformat -Werror=format-security -O3 -mavx2 opal.cpp
g++: error: unrecognized command-line option ‘-mavx2’
make[2]: *** [Makefile:94: opal/opal.o] Error 1
This does likely also cause a baseline violation on amd64,
defeating the purpose of building for different SIMD levels.
--- End Message ---
--- Begin Message ---
Source: rna-star
Source-Version: 2.7.9a+dfsg-2
Done: Nilesh Patra <[email protected]>
We believe that the bug you reported is fixed in the latest version of
rna-star, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Nilesh Patra <[email protected]> (supplier of updated rna-star package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 18 Aug 2021 12:20:57 +0530
Source: rna-star
Architecture: source
Version: 2.7.9a+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Nilesh Patra <[email protected]>
Closes: 992270
Changes:
rna-star (2.7.9a+dfsg-2) unstable; urgency=medium
.
* d/p/do-not-enforce-avx2.patch: Remove usage of
-mavx2 by default (Closes: #992270)
* d/salsa-ci.yml: Disable reprotest and build on i386
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