Your message dated Mon, 18 Oct 2021 07:48:36 +0000
with message-id <[email protected]>
and subject line Bug#996469: fixed in qiime 2021.8.0-2
has caused the Debian Bug report #996469,
regarding qiime: Test errors with python3-decorator 5
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
996469: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=996469
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: qiime
Severity: normal
Tags: upstream
X-Debbugs-Cc: [email protected]
I recently uploaded python-decorator 5.1 to experimental. This appears
to break qiime (or qiime's test suite, at least).
https://ci.debian.net/data/autopkgtest/unstable/amd64/q/qiime/15900873/log.gz
This appears to be consistent with `ci/recipe/meta.yaml`
(decorator >=4,<5).
Is it possible to patch this for compatibility? The test outputs _look_
cosmetic (although might hide something deeper).
-- System Information:
Debian Release: bookworm/sid
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 5.14.0-2-amd64 (SMP w/1 CPU thread)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8), LANGUAGE=en_GB
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages qiime depends on:
ii python3 3.9.2-3
pn python3-bibtexparser <none>
ii python3-dateutil 2.8.1-6
ii python3-decorator 4.4.2-2
pn python3-dill <none>
ii python3-networkx 2.5+ds-2
ii python3-pandas 1.1.5+dfsg-2
ii python3-pyparsing 2.4.7-1
ii python3-tzlocal 2.1-1
ii python3-yaml 5.4.1-1
Versions of packages qiime recommends:
pn q2-cutadapt <none>
pn q2-demux <none>
pn q2-feature-classifier <none>
pn q2-feature-table <none>
pn q2-metadata <none>
pn q2-quality-filter <none>
pn q2-types <none>
pn q2cli <none>
pn q2templates <none>
qiime suggests no packages.
--- End Message ---
--- Begin Message ---
Source: qiime
Source-Version: 2021.8.0-2
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
qiime, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated qiime package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 17 Oct 2021 19:53:37 +0200
Source: qiime
Architecture: source
Version: 2021.8.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 996469
Changes:
qiime (2021.8.0-2) unstable; urgency=medium
.
* Team upload.
* Enable decorator 5.x in test suite
Closes: #996469
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