Your message dated Mon, 20 Dec 2021 09:03:28 +0000
with message-id <[email protected]>
and subject line Bug#1001291: fixed in binoculars 0.0.10-1
has caused the Debian Bug report #1001291,
regarding binoculars: autopkgtest tests for all supported python3 versions but 
vtk7 extensions don't exist for all
to be marked as done.

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-- 
1001291: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1001291
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: binoculars
Version: 0.0.6-1
Severity: serious
X-Debbugs-CC: [email protected]
Tags: sid bookworm
User: [email protected]
Usertags: needs-update
Control: affects -1 src:python3-defaults

Dear maintainer(s),

With a recent upload of python3-defaults the autopkgtest of binoculars fails in testing when that autopkgtest is run with the binary packages of python3-defaults from unstable. It passes when run with only packages from testing. In tabular form:

                       pass            fail
python3-defaults       from testing    3.9.8-1
binoculars             from testing    0.0.6-1
all others             from testing    from testing

I copied some of the output at the bottom of this report. It seems you're testing for all supported Python3 version in Debian, but one of your dependencies doesn't provide the required extensions (bug #951300). Either convince the maintainer of that package to build the extensions, or only test with the default Python3 version.

Currently this regression is blocking the migration of python3-defaults to testing [1].

More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation

Paul

[1] https://qa.debian.org/excuses.php?package=python3-defaults

https://ci.debian.net/data/autopkgtest/testing/amd64/b/binoculars/17344284/log.gz

Testing with python3.10:
test_IO (test_cfg.TestCase) ... ok
test_id03 (unittest.loader._FailedTest) ... ERROR
test_metadata (unittest.loader._FailedTest) ... ERROR

======================================================================
ERROR: test_id03 (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_id03
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/vtk/vtkCommonCore.py", line 5, in <module>
    from .vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtk.vtkCommonCorePython'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
File "/usr/lib/python3.10/unittest/loader.py", line 436, in _find_test_path
    module = self._get_module_from_name(name)
File "/usr/lib/python3.10/unittest/loader.py", line 377, in _get_module_from_name
    __import__(name)
File "/tmp/autopkgtest-lxc.73x5fv_7/downtmp/autopkgtest_tmp/tests/test_id03.py", line 1, in <module>
    from binoculars.backends import id03
File "/usr/lib/python3/dist-packages/binoculars/backends/id03.py", line 10, in <module>
    from .. import backend, errors, util
File "/usr/lib/python3/dist-packages/binoculars/backend.py", line 1, in <module>
    from . import util, errors, dispatcher
File "/usr/lib/python3/dist-packages/binoculars/dispatcher.py", line 9, in <module>
    from . import util, errors, space
File "/usr/lib/python3/dist-packages/binoculars/space.py", line 13, in <module>
    from vtk import vtkImageData, vtkXMLImageDataWriter
File "/usr/lib/python3/dist-packages/vtk/__init__.py", line 41, in <module>
    from .vtkCommonCore import *
File "/usr/lib/python3/dist-packages/vtk/vtkCommonCore.py", line 9, in <module>
    from vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtkCommonCorePython'


======================================================================
ERROR: test_metadata (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_metadata
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/vtk/vtkCommonCore.py", line 5, in <module>
    from .vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtk.vtkCommonCorePython'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
File "/usr/lib/python3.10/unittest/loader.py", line 436, in _find_test_path
    module = self._get_module_from_name(name)
File "/usr/lib/python3.10/unittest/loader.py", line 377, in _get_module_from_name
    __import__(name)
File "/tmp/autopkgtest-lxc.73x5fv_7/downtmp/autopkgtest_tmp/tests/test_metadata.py", line 2, in <module>
    import binoculars.space
File "/usr/lib/python3/dist-packages/binoculars/space.py", line 13, in <module>
    from vtk import vtkImageData, vtkXMLImageDataWriter
File "/usr/lib/python3/dist-packages/vtk/__init__.py", line 41, in <module>
    from .vtkCommonCore import *
File "/usr/lib/python3/dist-packages/vtk/vtkCommonCore.py", line 9, in <module>
    from vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtkCommonCorePython'


----------------------------------------------------------------------
Ran 3 tests in 0.022s

FAILED (errors=2)
ConfigFile{
  [dispatcher]
    destination = b'demo_{first}-{last}.hdf5'
    overwrite = b'true'
    type = b'local'
  [projection]
    resolution = b'0.002, 0.002, 1'
    type = b'id03:hklprojection'
  [input]
    centralpixel = b'40, 255'
    imagefolder = b'/path/to/data/images/{rUCCD[0]}/'
    pixelsize = b'0.055, 0.055'
    sdd = b'1050'
    specfile = b'/path/to/data/file.spec'
    target_weight = b'4000'
    type = b'id03:eh1'
    xmask = b'50-235'
    ymask = b'185-253,262-400'
}
origin = test.hdf5
command = autopkgtest [20:13:55]: test command1

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Description: OpenPGP digital signature


--- End Message ---
--- Begin Message ---
Source: binoculars
Source-Version: 0.0.10-1
Done: Picca Frédéric-Emmanuel <[email protected]>

We believe that the bug you reported is fixed in the latest version of
binoculars, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Picca Frédéric-Emmanuel <[email protected]> (supplier of updated binoculars 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Mon, 20 Dec 2021 09:48:28 +0100
Source: binoculars
Architecture: source
Version: 0.0.10-1
Distribution: unstable
Urgency: medium
Maintainer: Debian PaN Maintainers 
<[email protected]>
Changed-By: Picca Frédéric-Emmanuel <[email protected]>
Closes: 1001291
Changes:
 binoculars (0.0.10-1) unstable; urgency=medium
 .
   [ Neil Williams ]
   * Update control to add Debian PaN maintainers
 .
   [ Picca Frédéric-Emmanuel ]
   * New upstream version 0.0.10
   * removed useless d/gbp.conf
   * Bump debhelper from old 12 to 13.
   * Set upstream metadata fields: Repository, Repository-Browse.
   * Update standards version to 4.6.0, no changes needed.
   * Bug fix: "autopkgtest tests for all supported python3 versions but
     vtk7 extensions don't exist for all", thanks to Paul Gevers
     (Closes: #1001291).
Checksums-Sha1:
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binoculars_0.0.10-1.dsc
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Files:
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 c3c81a218c4722603167e90ce8b87c5d 226212 science optional 
binoculars_0.0.10.orig.tar.gz
 7d1749c51506c3306ca9b38d61a332c3 3220 science optional 
binoculars_0.0.10-1.debian.tar.xz

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