Your message dated Wed, 17 Jan 2024 10:19:35 +0000
with message-id <[email protected]>
and subject line Bug#1060807: fixed in zfp 1.0.1-3
has caused the Debian Bug report #1060807,
regarding zfp: please compile zfp with -DBIT_STREAM_WORD_TYPE=uint8
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1060807: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060807
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: zfp
Severity: important
Dear Maintainer,
since the upload of zfp 1.0.1, the test of hdf5plugin are failing
look at here
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1059842
It seems to me that the zfp library should be recompile with the previous flag.
thanks
Frederic.
PS: Il also recompiled locally h5z-zfp and now the unit test is also failling
with these errors
H5Dcreate failed at line 405, errno=2 (No such file or directory)
[ESC[31;01mFAILEDESC[0m]
./test_write_plugin zfpmode=2 prec=16 .......................HDF5-DIAG: Error
detected in HDF5 (1.10.10) thread 1:
#000: ../../../src/H5D.c line 140 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 328 in H5D__create_named(): unable to create
and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1542 in H5L_link_object(): unable to create new
link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1785 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 830 in H5G_traverse(): internal path
traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 607 in H5G__traverse_real(): traversal
operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1590 in H5L__link_cb(): unable to create object
major: Links
minor: Unable to initialize object
#007: ../../../src/H5Oint.c line 2459 in H5O_obj_create(): unable to open
object
major: Object header
minor: Can't open object
#008: ../../../src/H5Doh.c line 287 in H5O__dset_create(): unable to create
dataset
major: Dataset
minor: Unable to initialize object
#009: ../../../src/H5Dint.c line 1196 in H5D__create(): I/O filters can't
operate on this dataset
major: Invalid arguments to routine
minor: Unable to initialize object
#010: ../../../src/H5Z.c line 891 in H5Z_can_apply(): unable to apply filter
major: Data filters
minor: Error from filter 'can apply' callback
#011: ../../../src/H5Z.c line 852 in H5Z__prepare_prelude_callback_dcpl():
unable to apply filter
major: Data filters
minor: Error from filter 'can apply' callback
#012: ../../../src/H5Z.c line 753 in H5Z__prelude_callback(): error during
user callback
major: Data filters
minor: Error from filter 'can apply' callback
#013: H5Zzfp.c line 158 in H5Z_zfp_can_apply(): ZFP lib not compiled with
-DBIT_STREAM_WORD_TYPE=uint8
major: Data filters
minor: Unable to initialize object
H5Dcreate failed at line 405, errno=2 (No such file or directory)
[ESC[31;01mFAILEDESC[0m]
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 6.6.9-amd64 (SMP w/4 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE,
TAINT_UNSIGNED_MODULE
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
--- End Message ---
--- Begin Message ---
Source: zfp
Source-Version: 1.0.1-3
Done: Antonio Valentino <[email protected]>
We believe that the bug you reported is fixed in the latest version of
zfp, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Antonio Valentino <[email protected]> (supplier of updated zfp
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 17 Jan 2024 08:08:28 +0000
Source: zfp
Architecture: source
Version: 1.0.1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Antonio Valentino <[email protected]>
Closes: 1060807
Changes:
zfp (1.0.1-3) unstable; urgency=medium
.
* debian/rules:
- Revert the changes in the BIT_STREAM_WORD_TYPE configuration
implemneted with the upload of the upstream version 1.0.1 and
skip the failing tests (Closes: #1060807).
According to https://github.com/LLNL/zfp/issues/51, test failures
in ZFP uni tests are gue to limitations of the test suite implementation
not supporting all possible configurations.
On the other hand some of the packages that depend on ZFP, like, e.g.,
h5z-fzp mandatorily require the old configuration.
* debian/patches:
- New 0002-Skip-broken-tests.patch (see comments above).
* Update d/copyright.
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--- End Message ---
