Your message dated Thu, 18 Apr 2024 17:04:47 +0000
with message-id <[email protected]>
and subject line Bug#1069234: fixed in bcftools 1.20-1
has caused the Debian Bug report #1069234,
regarding bcftools: gff2gff.py and guess-ploidy.py fails to run
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1069234: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1069234
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: bcftools
Version: 1.19-1+b1
Severity: normal
Dear Maintainer,
gff2gff.py fails to run with the error:
$ gff2gff.py --help
Traceback (most recent call last):
File "/usr/bin/gff2gff.py", line 13, in <module>
import gffutils
ModuleNotFoundError: No module named 'gffutils'
And guess-ploidy.py fails to run with the error:
$ guess-ploidy.py --help
Traceback (most recent call last):
File "/usr/bin/guess-ploidy.py", line 29, in <module>
import matplotlib as mpl
ModuleNotFoundError: No module named 'matplotlib'
Its missing the runtime dependencies.
--
Regards
Sudip
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable')
Architecture: amd64 (x86_64)
Kernel: Linux 6.6.13-amd64 (SMP w/8 CPU threads; PREEMPT)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8),
LANGUAGE=en_GB:en
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages bcftools depends on:
ii libc6 2.37-17
ii libhts3t64 1.19+ds-1.1+b1
Versions of packages bcftools recommends:
ii perl 5.38.2-3
Versions of packages bcftools suggests:
ii python3 3.11.8-1
pn python3-matplotlib <none>
pn python3-numpy <none>
pn texlive-latex-recommended <none>
--- End Message ---
--- Begin Message ---
Source: bcftools
Source-Version: 1.20-1
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
bcftools, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated bcftools package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Thu, 18 Apr 2024 17:14:39 +0200
Source: bcftools
Architecture: source
Version: 1.20-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1069234
Changes:
bcftools (1.20-1) unstable; urgency=medium
.
[ Charles Plessy ]
* Team upload.
* New upstream version
.
[ Andreas Tille ]
* Add missing Depends
Closes: #1069234
* Standards-Version: 4.7.0 (routine-update)
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