Your message dated Sat, 06 Jul 2024 20:50:14 +0000
with message-id <[email protected]>
and subject line Bug#1075151: fixed in libbpp-qt 2.4.1-12
has caused the Debian Bug report #1075151,
regarding libbpp-popgen: ftbfs with GCC-14
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1075151: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1075151
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:libbpp-popgen
Version: 2.4.1-10
Severity: important
Tags: sid trixie
User: [email protected]
Usertags: ftbfs-gcc-14
[This bug is targeted to the upcoming trixie release]
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-14/g++-14, but succeeds to build with gcc-13/g++-13. The
severity of this report will be raised before the trixie release.
The full build log can be found at:
http://qa-logs.debian.net/2024/07/01/libbpp-popgen_2.4.1-10_unstable_gccexp.log
The last lines of the build log are at the end of this report.
To build with GCC 14, either set CC=gcc-14 CXX=g++-14 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-14/porting_to.html
[...]
-
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJRKdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
2.4.1
-
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
2.4.1
- _ZNSt6vectorIdSaIdEED1Ev@Base 2.4.1
- _ZNSt6vectorIdSaIdEED2Ev@Base 2.4.1
+ _ZNSt6vectorIdSaIdEE17_M_realloc_appendIJRKdEEEvDpOT_@Base 2.4.1-10
+ _ZNSt6vectorIdSaIdEE17_M_realloc_appendIJdEEEvDpOT_@Base 2.4.1-10
+#MISSING: 2.4.1-10#
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJRKdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorIdSaIdEED1Ev@Base 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorIdSaIdEED2Ev@Base 2.4.1
_ZNSt6vectorIjSaIjEE17_M_default_appendEm@Base 2.4.1
-
_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base
2.4.1
- _ZNSt6vectorIjSaIjEED1Ev@Base 2.4.1
- _ZNSt6vectorIjSaIjEED2Ev@Base 2.4.1
+#MISSING: 2.4.1-10#
_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base
2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorIjSaIjEED1Ev@Base 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorIjSaIjEED2Ev@Base 2.4.1
_ZNSt6vectorImSaImEE17_M_default_appendEm@Base 2.4.1
-
_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
2.4.1
-
_ZNSt6vectorImSaImEE17_M_realloc_insertIJmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
2.4.1
- _ZNSt6vectorImSaImEED1Ev@Base 2.4.1
- _ZNSt6vectorImSaImEED2Ev@Base 2.4.1
+ _ZNSt6vectorImSaImEE17_M_realloc_appendIJRKmEEEvDpOT_@Base 2.4.1-10
+ _ZNSt6vectorImSaImEE17_M_realloc_appendIJmEEEvDpOT_@Base 2.4.1-10
+#MISSING: 2.4.1-10#
_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt6vectorImSaImEE17_M_realloc_insertIJmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorImSaImEED1Ev@Base 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorImSaImEED2Ev@Base 2.4.1
_ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED0Ev@Base 2.4.1
_ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED1Ev@Base 2.4.1
_ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED2Ev@Base 2.4.1
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EE16_M_insert_uniqueIRKS5_EESt4pairISt17_Rb_tree_iteratorIS5_EbEOT_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp23VectorSequenceContainerEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp23VectorSequenceContainerEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St3setIS5_St4lessIS5_ESaIS5_EEESt10_Select1stISD_ESA_SaISD_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St3setIS5_St4lessIS5_ESaIS5_EEESt10_Select1stISD_ESA_SaISD_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISD_ERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp23VectorSequenceContainerEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp23VectorSequenceContainerEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St3setIS5_St4lessIS5_ESaIS5_EEESt10_Select1stISD_ESA_SaISD_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St3setIS5_St4lessIS5_ESaIS5_EEESt10_Select1stISD_ESA_SaISD_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISD_ERS7_@Base
2.4.1
+
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJOS5_EESJ_IJEEEEESt17_Rb_tree_iteratorIS8_ESt23_Rb_tree_const_iteratorIS8_EDpOT_@Base
2.4.1-10
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
2.4.1
+
_ZNSt8_Rb_treeImSt4pairIKmN3bpp28MultilocusGenotypeStatistics6FstatsEESt10_Select1stIS5_ESt4lessImESaIS5_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESG_IJEEEEESt17_Rb_tree_iteratorIS5_ESt23_Rb_tree_const_iteratorIS5_EDpOT_@Base
2.4.1-10
+
_ZNSt8_Rb_treeImSt4pairIKmNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESt10_Select1stIS8_ESt4lessImESaIS8_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESJ_IJEEEEESt17_Rb_tree_iteratorIS8_ESt23_Rb_tree_const_iteratorIS8_EDpOT_@Base
2.4.1-10
_ZSt10scientificRSt8ios_base@Base 2.4.1
_ZSt13__heap_selectIN9__gnu_cxx17__normal_iteratorIPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEENS0_5__ops15_Iter_less_iterEEvT_SF_SF_T0_@Base
2.4.1
_ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEEPS7_ET0_T_SG_SF_@Base
2.4.1
_ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKSt6vectorIdSaIdEES2_IS4_SaIS4_EEEEPS4_ET0_T_SC_SB_@Base
2.4.1
- _ZSt16__do_uninit_copyIPKN3bpp9LocusInfoEPS1_ET0_T_S6_S5_@Base 2.4.1
+#MISSING: 2.4.1-10#
_ZSt16__do_uninit_copyIPKN3bpp9LocusInfoEPS1_ET0_T_S6_S5_@Base 2.4.1
_ZSt5fixedRSt8ios_base@Base 2.4.1
-
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_@Base
2.4.1
+#MISSING: 2.4.1-10#
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_@Base
2.4.1
_ZTIN3bpp10AlleleInfoE@Base 2.4.1
_ZTIN3bpp10IndividualE@Base 2.4.1
_ZTIN3bpp10SymbolListE@Base 2.4.1
dh_makeshlibs: error: failing due to earlier errors
make: *** [debian/rules:8: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--- End Message ---
--- Begin Message ---
Source: libbpp-qt
Source-Version: 2.4.1-12
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
libbpp-qt, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated libbpp-qt package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 06 Jul 2024 22:14:58 +0200
Source: libbpp-qt
Architecture: source
Version: 2.4.1-12
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1075151
Changes:
libbpp-qt (2.4.1-12) unstable; urgency=medium
.
* Since every GCC version bump ends up in a bug caused by the need to
update symbols files we stop providing symbols for this library
Closes: #1075151
* lintian-override for no-symbols-control-file
Checksums-Sha1:
93317e61442ec471020d8fc944f49bee7b2dfa0d 2182 libbpp-qt_2.4.1-12.dsc
33a1c965e2cee1338f7d37be9615bcf1f3c8562f 10872 libbpp-qt_2.4.1-12.debian.tar.xz
da34ef9e500dac719d499f8f64d79082fee23c01 12111
libbpp-qt_2.4.1-12_amd64.buildinfo
Checksums-Sha256:
bc8d70d971f58ade304172d67f5e60ede641f62bfbc164843c960c938ca9774c 2182
libbpp-qt_2.4.1-12.dsc
0740250292322f07f99bd01de2410774c19ab97468b3cbc64693e6d33021029b 10872
libbpp-qt_2.4.1-12.debian.tar.xz
e102fe52c8725b9318068a3920101eaf24aa63c22799098c6461bed1a06b9f47 12111
libbpp-qt_2.4.1-12_amd64.buildinfo
Files:
134952a302e3f7c29babe92a7a1b4484 2182 science optional libbpp-qt_2.4.1-12.dsc
338729db7b64e2cb2f742c83a4aa1ff4 10872 science optional
libbpp-qt_2.4.1-12.debian.tar.xz
09b08f74fb3a5dafe2189b583a3ee143 12111 science optional
libbpp-qt_2.4.1-12_amd64.buildinfo
-----BEGIN PGP SIGNATURE-----
iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmaJps4RHHRpbGxlQGRl
Ymlhbi5vcmcACgkQV4oElNHGRtHMyQ/+L4HtsFD4O9/VDkPjcCsHV7aoXAoUZGgF
NheCih7qBJxJthp15ABeWjplJtU5OE3eITEqM8CaSbh1Aq9wZMCEFy2CHaeUwodj
yFYs5CNBnjqwjq2+oHgUOkB+GW+kTHBCNyae7BRBRJzJg4tRMMyuSrrbYPAYorV5
ZohInmsu6gKyArLda9Kua9ADsO7fveBDTMgYg8Z0k4GnPdTl3VqbMxVQ+xAkm43o
zAsWCGdPxd0LmhCCvKWCHAKlBU8bmI3tiFeuDxLNB5SaOQLEt8/SnheOIhRcOWeB
6EJwbRTnv/Ulpgk+T2VDSLJaUgRWIPsO942BmQi1c4roI2tLzuz3kIkLbixsgBG9
aLc3aLbrkOCZKVVN0/BkIjwIraAFruZzydZE7ZGAq6QjsyGNaI5NqWNpqquPwo3Z
P4tCMfHPe8nZDabFD1U8UaLTIhboX5YHEHiJCxQJqk4WamusYrf2FoQvcf3xmbLS
69946v211kkCiczMcbpmA2q7opEssM9T8XiupjimjQ9adkiaB+fpUlb6rak7Q3pW
K1UgroVRjQJWKEQHLUtE799PSyEEcjxoYA39R1afNfK2lCcUHGcTRBcp2IVzF4em
k27E4iXvTRZc5iOLCevX7nPbVnrgGiX3HofJpjHshr9R8/JiXer3TMcTX9cgjLf1
rc4XAlEqTlo=
=EGSO
-----END PGP SIGNATURE-----
pgpbNavPujAIu.pgp
Description: PGP signature
--- End Message ---