Your message dated Sat, 13 Jul 2024 06:20:50 +0000
with message-id <[email protected]>
and subject line Bug#1075151: fixed in libbpp-popgen 2.4.1-11
has caused the Debian Bug report #1075151,
regarding libbpp-popgen: ftbfs with GCC-14
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)


-- 
1075151: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1075151
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:libbpp-popgen
Version: 2.4.1-10
Severity: important
Tags: sid trixie
User: [email protected]
Usertags: ftbfs-gcc-14

[This bug is targeted to the upcoming trixie release]

Please keep this issue open in the bug tracker for the package it
was filed for.  If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.

The package fails to build in a test rebuild on at least amd64 with
gcc-14/g++-14, but succeeds to build with gcc-13/g++-13. The
severity of this report will be raised before the trixie release.

The full build log can be found at:
http://qa-logs.debian.net/2024/07/01/libbpp-popgen_2.4.1-10_unstable_gccexp.log
The last lines of the build log are at the end of this report.

To build with GCC 14, either set CC=gcc-14 CXX=g++-14 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t=experimental install g++ 

Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-14/porting_to.html

[...]
- 
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJRKdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
 2.4.1
- 
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
 2.4.1
- _ZNSt6vectorIdSaIdEED1Ev@Base 2.4.1
- _ZNSt6vectorIdSaIdEED2Ev@Base 2.4.1
+ _ZNSt6vectorIdSaIdEE17_M_realloc_appendIJRKdEEEvDpOT_@Base 2.4.1-10
+ _ZNSt6vectorIdSaIdEE17_M_realloc_appendIJdEEEvDpOT_@Base 2.4.1-10
+#MISSING: 2.4.1-10# 
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJRKdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorIdSaIdEED1Ev@Base 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorIdSaIdEED2Ev@Base 2.4.1
  _ZNSt6vectorIjSaIjEE17_M_default_appendEm@Base 2.4.1
- 
_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base
 2.4.1
- _ZNSt6vectorIjSaIjEED1Ev@Base 2.4.1
- _ZNSt6vectorIjSaIjEED2Ev@Base 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base
 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorIjSaIjEED1Ev@Base 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorIjSaIjEED2Ev@Base 2.4.1
  _ZNSt6vectorImSaImEE17_M_default_appendEm@Base 2.4.1
- 
_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
 2.4.1
- 
_ZNSt6vectorImSaImEE17_M_realloc_insertIJmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
 2.4.1
- _ZNSt6vectorImSaImEED1Ev@Base 2.4.1
- _ZNSt6vectorImSaImEED2Ev@Base 2.4.1
+ _ZNSt6vectorImSaImEE17_M_realloc_appendIJRKmEEEvDpOT_@Base 2.4.1-10
+ _ZNSt6vectorImSaImEE17_M_realloc_appendIJmEEEvDpOT_@Base 2.4.1-10
+#MISSING: 2.4.1-10# 
_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt6vectorImSaImEE17_M_realloc_insertIJmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base
 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorImSaImEED1Ev@Base 2.4.1
+#MISSING: 2.4.1-10# _ZNSt6vectorImSaImEED2Ev@Base 2.4.1
  _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED0Ev@Base 2.4.1
  _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED1Ev@Base 2.4.1
  _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED2Ev@Base 2.4.1
  
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EE16_M_insert_uniqueIRKS5_EESt4pairISt17_Rb_tree_iteratorIS5_EbEOT_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp23VectorSequenceContainerEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp23VectorSequenceContainerEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St3setIS5_St4lessIS5_ESaIS5_EEESt10_Select1stISD_ESA_SaISD_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St3setIS5_St4lessIS5_ESaIS5_EEESt10_Select1stISD_ESA_SaISD_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISD_ERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
- 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp23VectorSequenceContainerEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp23VectorSequenceContainerEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St3setIS5_St4lessIS5_ESaIS5_EEESt10_Select1stISD_ESA_SaISD_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St3setIS5_St4lessIS5_ESaIS5_EEESt10_Select1stISD_ESA_SaISD_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISD_ERS7_@Base
 2.4.1
+ 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJOS5_EESJ_IJEEEEESt17_Rb_tree_iteratorIS8_ESt23_Rb_tree_const_iteratorIS8_EDpOT_@Base
 2.4.1-10
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_dESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base
 2.4.1
+ 
_ZNSt8_Rb_treeImSt4pairIKmN3bpp28MultilocusGenotypeStatistics6FstatsEESt10_Select1stIS5_ESt4lessImESaIS5_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESG_IJEEEEESt17_Rb_tree_iteratorIS5_ESt23_Rb_tree_const_iteratorIS5_EDpOT_@Base
 2.4.1-10
+ 
_ZNSt8_Rb_treeImSt4pairIKmNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESt10_Select1stIS8_ESt4lessImESaIS8_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESJ_IJEEEEESt17_Rb_tree_iteratorIS8_ESt23_Rb_tree_const_iteratorIS8_EDpOT_@Base
 2.4.1-10
  _ZSt10scientificRSt8ios_base@Base 2.4.1
  
_ZSt13__heap_selectIN9__gnu_cxx17__normal_iteratorIPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEENS0_5__ops15_Iter_less_iterEEvT_SF_SF_T0_@Base
 2.4.1
  
_ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEEPS7_ET0_T_SG_SF_@Base
 2.4.1
  
_ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKSt6vectorIdSaIdEES2_IS4_SaIS4_EEEEPS4_ET0_T_SC_SB_@Base
 2.4.1
- _ZSt16__do_uninit_copyIPKN3bpp9LocusInfoEPS1_ET0_T_S6_S5_@Base 2.4.1
+#MISSING: 2.4.1-10# 
_ZSt16__do_uninit_copyIPKN3bpp9LocusInfoEPS1_ET0_T_S6_S5_@Base 2.4.1
  _ZSt5fixedRSt8ios_base@Base 2.4.1
- 
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_@Base
 2.4.1
+#MISSING: 2.4.1-10# 
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_@Base
 2.4.1
  _ZTIN3bpp10AlleleInfoE@Base 2.4.1
  _ZTIN3bpp10IndividualE@Base 2.4.1
  _ZTIN3bpp10SymbolListE@Base 2.4.1
dh_makeshlibs: error: failing due to earlier errors
make: *** [debian/rules:8: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2

--- End Message ---
--- Begin Message ---
Source: libbpp-popgen
Source-Version: 2.4.1-11
Done: Andreas Tille <[email protected]>

We believe that the bug you reported is fixed in the latest version of
libbpp-popgen, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated libbpp-popgen package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Sat, 13 Jul 2024 06:55:24 +0200
Source: libbpp-popgen
Architecture: source
Version: 2.4.1-11
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1075151
Changes:
 libbpp-popgen (2.4.1-11) unstable; urgency=medium
 .
   * Since every GCC version bump ends up in a bug caused by the need to
     update symbols files we stop providing symbols for this library
     Closes: #1075151
   * lintian-override for no-symbols-control-file
   * Standards-Version: 4.7.0
Checksums-Sha1:
 9b4e74961fd0f679f9499e217bc65f7021bbc4cc 2218 libbpp-popgen_2.4.1-11.dsc
 a90efe53365d682ecb7d49d7b8bb3153de473cd6 15316 
libbpp-popgen_2.4.1-11.debian.tar.xz
 779fe8878bdb2a9ef82c9368adf13c65753e7468 27905 
libbpp-popgen_2.4.1-11_source.buildinfo
Checksums-Sha256:
 dd40029a4fcfc7423fc1b3500ca5b76b3037c5d5975ca3ab3bd44c1dd6946faf 2218 
libbpp-popgen_2.4.1-11.dsc
 7247a42114a4dfc08e991a64f03ae65d10c33f41c3a8fabbb379a1ead9be71ef 15316 
libbpp-popgen_2.4.1-11.debian.tar.xz
 9ed50869a140b747cc008fdc0fdc5e6199930a68d2eb224419beccb7cc46a2ae 27905 
libbpp-popgen_2.4.1-11_source.buildinfo
Files:
 82610835b971a89b826cfcd2d681a0d4 2218 science optional 
libbpp-popgen_2.4.1-11.dsc
 1ea6f7d87cc4067388431ca386dab0c5 15316 science optional 
libbpp-popgen_2.4.1-11.debian.tar.xz
 d6734aa0d4ec308f578425a09334d889 27905 science optional 
libbpp-popgen_2.4.1-11_source.buildinfo

-----BEGIN PGP SIGNATURE-----
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=ftb7
-----END PGP SIGNATURE-----

Attachment: pgps3hPd7726x.pgp
Description: PGP signature


--- End Message ---

Reply via email to