Your message dated Sun, 14 Jul 2024 18:30:49 +0000
with message-id <[email protected]>
and subject line Bug#1070841: fixed in r-bioc-iranges 2.38.1-1~0exp
has caused the Debian Bug report #1070841,
regarding r-bioc-iranges: autopkgtest regression with r-base 4.4.0
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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1070841: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1070841
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Contact [email protected] with problems
--- Begin Message ---
Source: r-bioc-iranges
Version: 2.36.0-1
Severity: serious
X-Debbugs-Cc: Dirk Eddelbuettel <[email protected]>
User: [email protected]
Usertags: regression
Hi Maintainer
r-bioc-iranges' autopkgtest regresses when tested with r-base 4.4.0
[1]. I've copied what I hope is the relevant part of the log below.
Regards
Graham
[1] https://ci.debian.net/packages/r/r-bioc-iranges/testing/amd64/
194s ***********************************************
194s Number of test functions: 98
194s Number of errors: 1
194s Number of failures: 0
194s
194s
194s 1 Test Suite :
194s IRanges RUnit Tests - 98 test functions, 1 error, 0 failures
194s ERROR in test_AtomicList_numerical: Error in FUN(X[[i]], ...) :
is.atomic(y) is not TRUE
194s
194s Test files with failing tests
194s
194s test_AtomicList-utils.R
194s test_AtomicList_numerical
194s
194s
194s Warning messages:
194s 1: In recycleListElements(e1, en) :
194s Some element lengths are not multiples of their corresponding
element length in e1
194s 2: In x + y :
194s longer object length is not a multiple of shorter object length
194s 3: In recycleListElements(e1, en) :
194s Some element lengths are not multiples of their corresponding
element length in e1
194s 4: In x + y :
194s longer object length is not a multiple of shorter object length
194s Execution halted
--- End Message ---
--- Begin Message ---
Source: r-bioc-iranges
Source-Version: 2.38.1-1~0exp
Done: Michael R. Crusoe <[email protected]>
We believe that the bug you reported is fixed in the latest version of
r-bioc-iranges, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <[email protected]> (supplier of updated r-bioc-iranges
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
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Hash: SHA512
Format: 1.8
Date: Tue, 09 Jul 2024 18:29:51 +0200
Source: r-bioc-iranges
Architecture: source
Version: 2.38.1-1~0exp
Distribution: experimental
Urgency: low
Maintainer: Debian R Packages Maintainers <[email protected]>
Changed-By: Michael R. Crusoe <[email protected]>
Closes: 1070841
Changes:
r-bioc-iranges (2.38.1-1~0exp) experimental; urgency=low
.
* Team upload.
* New upstream version. Closes: #1070841
* Set upstream metadata fields: Archive.
* d/control: Skip building on 32-bit systems.
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