Your message dated Tue, 13 Aug 2024 21:52:19 +0000
with message-id <[email protected]>
and subject line Bug#1078311: fixed in nbsphinx-link 1.3.0-4
has caused the Debian Bug report #1078311,
regarding pyvkfft: FTBFS: AttributeError: module 'docutils.nodes' has no
attribute 'reprunicode'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1078311: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1078311
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:pyvkfft
Version: 2024.1.2+ds1-2
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.12 setup.py config
/<<PKGBUILDDIR>>/setup.py:221: UserWarning: CUDA not available
($CUDAHOME/$CUDA_PATH variables missing and nvcc not in path. Skipping pyvkfft.cuda module
installation.
warnings.warn("CUDA not available ($CUDAHOME/$CUDA_PATH variables missing "
running config
dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3 setup.py build
/<<PKGBUILDDIR>>/setup.py:221: UserWarning: CUDA not available
($CUDAHOME/$CUDA_PATH variables missing and nvcc not in path. Skipping pyvkfft.cuda module
installation.
warnings.warn("CUDA not available ($CUDAHOME/$CUDA_PATH variables missing "
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/config.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/tune.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/benchmark.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/base.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/version.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/fft.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/cuda.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/accuracy.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
copying pyvkfft/opencl.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/scripts
copying pyvkfft/scripts/pyvkfft_test.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/scripts
copying pyvkfft/scripts/pyvkfft_test_suite.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/scripts
copying pyvkfft/scripts/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/scripts
copying pyvkfft/scripts/pyvkfft_benchmark.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/scripts
copying pyvkfft/scripts/pyvkfft_info.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/scripts
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/test
copying pyvkfft/test/_test_opencl_lib.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/test
copying pyvkfft/test/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/test
copying pyvkfft/test/_test_cuda_lib.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/test
copying pyvkfft/test/test_fft.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/test
running egg_info
creating pyvkfft.egg-info
writing pyvkfft.egg-info/PKG-INFO
writing dependency_links to pyvkfft.egg-info/dependency_links.txt
writing entry points to pyvkfft.egg-info/entry_points.txt
writing requirements to pyvkfft.egg-info/requires.txt
writing top-level names to pyvkfft.egg-info/top_level.txt
writing manifest file 'pyvkfft.egg-info/SOURCES.txt'
dependency vkFFT.h won't be automatically included in the manifest: the path
doesn't exist
reading manifest file 'pyvkfft.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.h' under directory 'src/VkFFT/vkFFT'
warning: no files found matching 'src/VkFFT/README.md'
warning: no files found matching 'src/VkFFT/LICENSE'
adding license file 'LICENSE'
writing manifest file 'pyvkfft.egg-info/SOURCES.txt'
running build_ext
building 'pyvkfft._vkfft_opencl' extension
creating build
creating build/temp.linux-x86_64-cpython-312
creating build/temp.linux-x86_64-cpython-312/src
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/VkFFT/vkFFT -Isrc
-I/usr/include/python3.12 -c src/vkfft_opencl.cpp -o
build/temp.linux-x86_64-cpython-312/src/vkfft_opencl.o -std=c++11 -Wno-format-security
-DVKFFT_MAX_FFT_DIMENSIONS=8
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’
is not valid for C++
In file included from /usr/include/CL/cl.h:20,
from /usr/include/vkFFT.h:60,
from src/vkfft_opencl.cpp:15:
/usr/include/CL/cl_version.h:22:104: note: ‘#pragma message: cl_version.h:
CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)’
22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined.
Defaulting to 300 (OpenCL 3.0)")
|
^
In file included from
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel2/vkFFT_FFT.h:46,
from
/usr/include/vkFFT/vkFFT_PlanManagement/vkFFT_Plans/vkFFT_Plan_FFT.h:31,
from
/usr/include/vkFFT/vkFFT_AppManagement/vkFFT_InitializeApp.h:30,
from /usr/include/vkFFT.h:106:
In function ‘void appendKernelStart_R2C(VkFFTSpecializationConstantsLayout*,
int)’,
inlined from ‘VkFFTResult
shaderGen_R2C_even_decomposition(VkFFTSpecializationConstantsLayout*, int)’ at
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel2/vkFFT_R2C_even_decomposition.h:71:23:
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h:351:38:
warning: ‘vecType’ may be used uninitialized [-Wmaybe-uninitialized]
351 | sc->tempLen = sprintf(sc->tempStr, ", __global %s*
twiddleLUT", vecType->name);
|
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h: In
function ‘VkFFTResult
shaderGen_R2C_even_decomposition(VkFFTSpecializationConstantsLayout*, int)’:
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h:260:22:
note: ‘vecType’ was declared here
260 | PfContainer* vecType;
| ^~~~~~~
In function ‘void appendKernelStart_R2C(VkFFTSpecializationConstantsLayout*,
int)’,
inlined from ‘VkFFTResult
shaderGen_R2C_even_decomposition(VkFFTSpecializationConstantsLayout*, int)’ at
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel2/vkFFT_R2C_even_decomposition.h:71:23:
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h:347:30:
warning: ‘inputMemoryType’ may be used uninitialized [-Wmaybe-uninitialized]
347 | sc->tempLen = sprintf(sc->tempStr, "(__global %s* inputs, __global %s*
outputs", inputMemoryType->name, outputMemoryType->name);
|
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h: In
function ‘VkFFTResult
shaderGen_R2C_even_decomposition(VkFFTSpecializationConstantsLayout*, int)’:
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h:263:22:
note: ‘inputMemoryType’ was declared here
263 | PfContainer* inputMemoryType;
| ^~~~~~~~~~~~~~~
In function ‘void appendKernelStart_R2C(VkFFTSpecializationConstantsLayout*,
int)’,
inlined from ‘VkFFTResult
shaderGen_R2C_even_decomposition(VkFFTSpecializationConstantsLayout*, int)’ at
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel2/vkFFT_R2C_even_decomposition.h:71:23:
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h:347:30:
warning: ‘outputMemoryType’ may be used uninitialized [-Wmaybe-uninitialized]
347 | sc->tempLen = sprintf(sc->tempStr, "(__global %s* inputs, __global %s*
outputs", inputMemoryType->name, outputMemoryType->name);
|
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h: In
function ‘VkFFTResult
shaderGen_R2C_even_decomposition(VkFFTSpecializationConstantsLayout*, int)’:
/usr/include/vkFFT/vkFFT_CodeGen/vkFFT_KernelsLevel0/vkFFT_KernelStartEnd.h:265:22:
note: ‘outputMemoryType’ was declared here
265 | PfContainer* outputMemoryType;
| ^~~~~~~~~~~~~~~~
x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro
-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/src/vkfft_opencl.o
-L/usr/lib/x86_64-linux-gnu -lOpenCL -o
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build/pyvkfft/_vkfft_opencl.cpython-312-x86_64-linux-gnu.so
--shared
debian/rules execute_after_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
I: pybuild base:311: echo /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build
env PYTHONPATH=/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pyvkfft/build \
SPHINXBUILD="python3 -m sphinx" \
SPHINXOPTS="-D mathjax_path=MathJax.js" \
/usr/bin/make -C doc html
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
Running Sphinx v7.4.7
loading translations [en]... done
making output directory... done
WARNING: html_static_path entry '_static' does not exist
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 21 source files that are out of date
updating environment: [new config] 21 added, 0 changed, 0 removed
reading sources... [ 5%] accuracy
reading sources... [ 10%] api/core-fft
reading sources... [ 14%] api/index
reading sources... [ 19%] api/simple-fft
reading sources... [ 24%] api/testing
Matplotlib created a temporary cache directory at /tmp/matplotlib-levkoxzl
because the default path (/sbuild-nonexistent/.config/matplotlib) is not a
writable directory; it is highly recommended to set the MPLCONFIGDIR
environment variable to a writable directory, in particular to speed up the
import of Matplotlib and to better support multiprocessing.
reading sources... [ 29%] changelog
reading sources... [ 33%] examples/accuracy
../README.rst:2: CRITICAL: Missing matching underline for section title
overline.
--------
See the accuracy notebook, which allows to compare the accuracy for different
FFT libraries (pyvkfft with different options and backend, scikit-cuda (cuFFT),
/<<PKGBUILDDIR>>/pyvkfft/tune.py:docstring of pyvkfft.tune.tune_vkfft:16:
ERROR: Unexpected indentation.
/<<PKGBUILDDIR>>/pyvkfft/tune.py:docstring of pyvkfft.tune.tune_vkfft:79:
ERROR: Unexpected indentation.
../CHANGELOG.rst:38: WARNING: Title underline too short.
Version 2023.2.post1 (2023-09-21)
-----------------------------
../CHANGELOG.rst:38: WARNING: Title underline too short.
Version 2023.2.post1 (2023-09-21)
-----------------------------
Exception occurred:
File "/usr/lib/python3/dist-packages/nbsphinx_link/__init__.py", line 192, in
parse
path = nodes.reprunicode(path)
^^^^^^^^^^^^^^^^^
AttributeError: module 'docutils.nodes' has no attribute 'reprunicode'
The full traceback has been saved in /tmp/sphinx-err-urbznl1z.log, if you want
to report the issue to the developers.
Please also report this if it was a user error, so that a better error message
can be provided next time.
A bug report can be filed in the tracker at
<https://github.com/sphinx-doc/sphinx/issues>. Thanks!
make[2]: *** [Makefile:20: html] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[1]: *** [debian/rules:11: execute_after_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:7: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202408/
About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Source: nbsphinx-link
Source-Version: 1.3.0-4
Done: Alexandre Detiste <[email protected]>
We believe that the bug you reported is fixed in the latest version of
nbsphinx-link, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alexandre Detiste <[email protected]> (supplier of updated nbsphinx-link package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 13 Aug 2024 23:14:33 +0200
Source: nbsphinx-link
Architecture: source
Version: 1.3.0-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Alexandre Detiste <[email protected]>
Closes: 1078311
Changes:
nbsphinx-link (1.3.0-4) unstable; urgency=medium
.
* Team Upload
* Add patch for newer docutils (Closes: #1078311)
* Set Rules-Requires-Root: no
* Use dh-sequence-python3
.
[ Debian Janitor ]
* Set upstream metadata fields: Repository-Browse.
* Update standards version to 4.6.1, no changes needed.
.
[ Sébastien Delafond ]
* d/control: remove myself from uploaders
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