Your message dated Sun, 15 Feb 2026 14:49:45 +0000
with message-id <[email protected]>
and subject line Bug#1045311: fixed in mira 4.9.6-12
has caused the Debian Bug report #1045311,
regarding mira: Fails to build source after successful build
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1045311: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1045311
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: mira
Version: 4.9.6-10
Severity: minor
Tags: trixie sid ftbfs
User: [email protected]
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: [email protected]
Usertags: qa-doublebuild
Hi,
This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).
This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.
More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild
Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env
> -us -uc -rfakeroot -S
> ---------------------------------------------------------------------------------------------------------------
>
> dpkg-buildpackage: info: source package mira
> dpkg-buildpackage: info: source version 4.9.6-10
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Nilesh Patra <[email protected]>
> dpkg-source --before-build .
> debian/rules clean
> dh clean
> rm -f debian/mira-assembler.debhelper.log debian/mira-doc.debhelper.log
> debian/mira-rfam-12s-rrna.debhelper.log
> debian/rules override_dh_auto_clean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> ( cd doc ; make clean ) || true
> make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
> Making clean in docbook
> make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/docbook'
> rm -rf .libs _libs
> rm -rf *html *pdf versionfile
> rm -f *.lo
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/docbook'
> make[3]: Entering directory '/<<PKGBUILDDIR>>/doc'
> rm -rf .libs _libs
> rm -f *.lo
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc'
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
> dh_auto_clean || true
> make -j8 distclean
> make[2]: Entering directory '/<<PKGBUILDDIR>>'
> Making distclean in man
> make[3]: Entering directory '/<<PKGBUILDDIR>>/man'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/man'
> Making distclean in src
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
> Making distclean in debuggersupport
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/debuggersupport'
> rm -rf .libs _libs
> test -z "libmiradebuggersupport.a" || rm -f libmiradebuggersupport.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/dbgsupport.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/debuggersupport'
> Making distclean in io
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/io'
> rm -rf .libs _libs
> rm -rf *flexer.cc *xxd.H
> test -z "libmirafio.a" || rm -f libmirafio.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/annotationmappings.Po
> rm -f ./.deps/exp.Po
> rm -f ./.deps/exp_flexer.Po
> rm -f ./.deps/fasta.Po
> rm -f ./.deps/fastq-mira.Po
> rm -f ./.deps/generalio.Po
> rm -f ./.deps/ncbiinfoxml.Po
> rm -f ./.deps/phd.Po
> rm -f ./.deps/scf.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/io'
> Making distclean in stdinc
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/stdinc'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/stdinc'
> Making distclean in errorhandling
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/errorhandling'
> rm -rf .libs _libs
> test -z "libmiraerrorhandling.a" || rm -f libmiraerrorhandling.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/errorhandling.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/errorhandling'
> Making distclean in util
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/util'
> rm -rf .libs _libs
> test -z "libmirautil.a libmiradptools.a libmirafmttext.a" || rm -f
> libmirautil.a libmiradptools.a libmirafmttext.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/dptools.Po
> rm -f ./.deps/fileanddisk.Po
> rm -f ./.deps/fmttext.Po
> rm -f ./.deps/machineinfo.Po
> rm -f ./.deps/misc.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/util'
> Making distclean in mira
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/mira'
> rm -rf .libs _libs
> rm -rf *flexer.cc *xxd.H
> test -z "libmiraestass.a libmira.a" || rm -f libmiraestass.a libmira.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/ads.Po
> rm -f ./.deps/adsfacts.Po
> rm -f ./.deps/align.Po
> rm -f ./.deps/assembly.Po
> rm -f ./.deps/assembly_buildcontigs.Po
> rm -f ./.deps/assembly_info.Po
> rm -f ./.deps/assembly_io.Po
> rm -f ./.deps/assembly_misc.Po
> rm -f ./.deps/assembly_output.Po
> rm -f ./.deps/assembly_pbcorrect.Po
> rm -f ./.deps/assembly_reduceskimhits.Po
> rm -f ./.deps/assembly_swalign.Po
> rm -f ./.deps/contig.Po
> rm -f ./.deps/contig_analysis.Po
> rm -f ./.deps/contig_consensus.Po
> rm -f ./.deps/contig_covanalysis.Po
> rm -f ./.deps/contig_edit.Po
> rm -f ./.deps/contig_featureinfo.Po
> rm -f ./.deps/contig_output.Po
> rm -f ./.deps/contig_pairconsistency.Po
> rm -f ./.deps/dataprocessing.Po
> rm -f ./.deps/dynamic.Po
> rm -f ./.deps/estassembly.Po
> rm -f ./.deps/gbf_parse.Po
> rm -f ./.deps/gff_parse.Po
> rm -f ./.deps/gff_save.Po
> rm -f ./.deps/hashstats.Po
> rm -f ./.deps/hashstats_sdbg.Po
> rm -f ./.deps/maf_parse.Po
> rm -f ./.deps/manifest.Po
> rm -f ./.deps/multitag.Po
> rm -f ./.deps/parameters.Po
> rm -f ./.deps/parameters_flexer.Po
> rm -f ./.deps/pcrcontainer.Po
> rm -f ./.deps/ppathfinder.Po
> rm -f ./.deps/preventinitfiasco.Po
> rm -f ./.deps/read.Po
> rm -f ./.deps/readgrouplib.Po
> rm -f ./.deps/readlotstat.Po
> rm -f ./.deps/readpool.Po
> rm -f ./.deps/readpool_io.Po
> rm -f ./.deps/sam_collect.Po
> rm -f ./.deps/scaffolder.Po
> rm -f ./.deps/seqtohash.Po
> rm -f ./.deps/simplebloomfilter.Po
> rm -f ./.deps/skim.Po
> rm -f ./.deps/skim_lowbph.Po
> rm -f ./.deps/warnings.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/mira'
> Making distclean in caf
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/caf'
> rm -rf .libs _libs
> rm -rf *flexer.cc
> test -z "libmiracaf.a" || rm -f libmiracaf.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/caf.Po
> rm -f ./.deps/caf_flexer.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/caf'
> Making distclean in memorc
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/memorc'
> rm -rf .libs _libs
> test -z "libmemorc.a" || rm -f libmemorc.a
> rm -f main
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/main.Po
> rm -f ./.deps/memorc.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/memorc'
> Making distclean in modules
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules'
> rm -rf .libs _libs
> test -z "libmiramodules.a" || rm -f libmiramodules.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/misc.Po
> rm -f ./.deps/mod_bait.Po
> rm -f ./.deps/mod_convert.Po
> rm -f ./.deps/mod_dbgreplay.Po
> rm -f ./.deps/mod_diff.Po
> rm -f ./.deps/mod_memestim.Po
> rm -f ./.deps/mod_mer.Po
> rm -f ./.deps/mod_mira.Po
> rm -f ./.deps/mod_scaffold.Po
> rm -f ./.deps/mod_sigconex.Po
> rm -f ./.deps/mod_tagsnp.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules'
> Making distclean in support
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/support'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/support'
> Making distclean in scripts
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
> Making distclean in version
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/version'
> rm -rf .libs _libs
> test -z "libmiraversion.a" || rm -f libmiraversion.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/mversion.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/version'
> Making distclean in progs
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/progs'
> rm -f mira
> rm -rf .libs _libs
> rm -f miratest
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/compileinfo.itxt.xxd.Po
> rm -f ./.deps/mira.Po
> rm -f ./.deps/miratest.Po
> rm -f ./.deps/quirks.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/progs'
> Making distclean in other
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/other'
> Making distclean in sls
> make[5]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls'
> Making distclean in mira-createsls
> make[6]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls'
> Making distclean in bin
> make[7]: Entering directory
> '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls/bin'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls/bin'
> make[7]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls'
> rm -f Makefile
> make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls'
> make[6]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls'
> rm -f Makefile
> make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls'
> make[5]: Entering directory '/<<PKGBUILDDIR>>/src/other'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/other'
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/other'
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
> make[3]: Entering directory '/<<PKGBUILDDIR>>'
> rm -rf .libs _libs
> find . -name "*~" -exec rm -rf {} \;
> rm -f *.lo
> test -z "" || rm -f
> find . -name ".pure" -exec rm -rf {} \;
> test . = "." || test -z "" || rm -f
> find . -name "*.o" -exec rm {} \;
> rm -f libtool config.lt
> find . -name "*.a" -exec rm {} \;
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> find . -name "bla_*" -exec rm {} \;
> rm -f cscope.out cscope.in.out cscope.po.out cscope.files
> find . -name "bin.*" -exec rm {} \;
> find . -name "log.*" -exec rm {} \;
> find . -name "*.bak" -exec rm {} \;
> find . -name "ttt*" -exec rm {} \;
> find . -name "TTT*" -exec rm {} \;
> find . -name "core" -exec rm {} \;
> find . -name "*.flex.C" -exec rm {} \;
> find . -name "*flexer.cc" -exec rm {} \;
> find . -type d -name "*.dSYM" -exec rm -rf {} \;
> make -C distribution clean
> find . -name ".deps" -exec rm -rf {} \;
> make[4]: Entering directory '/<<PKGBUILDDIR>>'
> make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make
> rule.
> rm -rf mira_`../build-aux/git-version-gen isshort
> ../.tarball-version`_linux-gnu_x86_64_dynamic *.tar *.gz
> rm -rf OSXstatlibs OSXstatlibs_bach
> rm -rf m4
> rm -rf Makefile Makefile.in aclocal.m4 config.status config.h config.h.in
> config.log configure autom4te.cache config.guess config.sub missing libtool
> rm -rf config
> rm -rf mira_*
> rm -rf 3rdparty*
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/distribution'
> make -C doc clean
> make[4]: Entering directory '/<<PKGBUILDDIR>>'
> make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make
> rule.
> cd .. && make am--refresh
> make[5]: Entering directory '/<<PKGBUILDDIR>>'
> make[5]: *** No rule to make target 'am--refresh'. Stop.
> make[5]: Leaving directory '/<<PKGBUILDDIR>>'
> make[4]: *** [Makefile:366: ../aclocal.m4] Error 2
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/doc'
> make[3]: *** [Makefile:887: clean-local] Error 2
> make[3]: Leaving directory '/<<PKGBUILDDIR>>'
> make[2]: *** [Makefile:416: distclean-recursive] Error 1
> make[2]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_auto_clean: error: make -j8 distclean returned exit code 2
> find * -name Makefile -exec rm '{}' ';'
> find * -name '*.xxd.H' -exec rm '{}' ';'
> find * -name '*.par.H' -exec rm '{}' ';'
> find * -name 'compileinfo.*' -exec rm '{}' ';'
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_autoreconf_clean
> rm -f -- ./install-sh ./m4/ltsugar.m4 ./m4/lt\~obsolete.m4
> ./m4/ltversion.m4 ./m4/libtool.m4 ./m4/ltoptions.m4 ./aclocal.m4 ./INSTALL
> ./autom4te.cache/requests ./autom4te.cache/traces.2 ./autom4te.cache/output.2
> ./autom4te.cache/output.3 ./autom4te.cache/output.1 ./autom4te.cache/traces.1
> ./autom4te.cache/traces.3 ./autom4te.cache/output.0 ./autom4te.cache/traces.0
> ./Makefile.in ./compile ./ltmain.sh ./man/Makefile.in ./configure
> ./src/memorc/Makefile.in ./src/version/Makefile.in ./src/progs/Makefile.in
> ./src/caf/Makefile.in ./src/io/Makefile.in ./src/Makefile.in
> ./src/support/Makefile.in ./src/modules/Makefile.in
> ./src/errorhandling/Makefile.in ./src/other/sls/Makefile.in
> ./src/other/sls/mira-createsls/Makefile.in
> ./src/other/sls/mira-createsls/bin/Makefile.in ./src/other/Makefile.in
> ./src/scripts/Makefile.in
> ./src/stdinc/Makefile.in ./src/debuggersupport/Makefile.in
> ./src/mira/Makefile.in ./src/util/Makefile.in ./mkinstalldirs
> ./distribution/Makefile.in ./depcomp ./configure\~ ./doc/docbook/Makefile.in
> ./doc/Makefile.in ./ylwrap ./missing
> rm -f debian/autoreconf.before debian/autoreconf.after
> dh_clean
> rm -f debian/debhelper-build-stamp
> cp -an --reflink=auto
> debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b
>
> debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b.tmp
> mv
> debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b.tmp
> config.guess
> cp -an --reflink=auto
> debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4
>
> debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4.tmp
> mv
> debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4.tmp
> config.sub
> rm -f debian/.debhelper/bucket/index
> rm -rf debian/.debhelper/
> rm -f -- debian/mira-assembler.substvars
> debian/mira-rfam-12s-rrna.substvars debian/mira-doc.substvars
> ./src/io/so.obo.xxd debian/files
> rm -fr -- debian/mira-assembler/ debian/tmp/ debian/mira-rfam-12s-rrna/
> debian/mira-doc/
> find . \( \( \
> \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path
> .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o
> -type f -a \
> \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
> -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
> -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
> -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
> \) -exec rm -f {} + \) -o \
> \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \)
> \)
> dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building mira using existing ./mira_4.9.6.orig.tar.bz2
> dpkg-source: info: using patch list from debian/patches/series
> dpkg-source: warning: ignoring deletion of file install-sh, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file aclocal.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file INSTALL, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file ltmain.sh, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file configure, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file mkinstalldirs, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file depcomp, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file ylwrap, use --include-removal
> to override
> dpkg-source: warning: ignoring deletion of file missing, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of directory m4
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_base.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_lib_expat.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_system.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_thread.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_iostreams.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_regex.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_filesystem.m4,
> use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_check_zlib.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_openmp.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file man/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/memorc/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/version/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/version/mversion.H, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file
> src/progs/compileinfo.itxt.xxd.C, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/progs/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/caf/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/caf/caf_flexer.cc, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/io/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/io/exp_flexer.cc, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/support/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/modules/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file
> src/errorhandling/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/other/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/other/sls/Makefile.in,
> use --include-removal to override
> dpkg-source: warning: ignoring deletion of file
> src/other/sls/mira-createsls/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file
> src/other/sls/mira-createsls/bin/Makefile.in, use --include-removal to
> override
> dpkg-source: warning: ignoring deletion of file src/scripts/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/stdinc/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file
> src/debuggersupport/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file
> src/mira/parameters_flexer.cc, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/mira/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/util/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file distribution/Makefile, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file distribution/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/Makefile, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/docbook/Makefile, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/docbook/Makefile.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file
> doc/docbook/images/warning.png.orig, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file
> doc/docbook/images/note.png.orig, use --include-removal to override
> dpkg-source: warning: file mira-4.9.6/.version has no final newline (either
> original or modified version)
> dpkg-source: info: local changes detected, the modified files are:
> mira-4.9.6/.version
> dpkg-source: error: aborting due to unexpected upstream changes, see
> /tmp/mira_4.9.6-10.diff.uDAlGs
> dpkg-source: info: Hint: make sure the version in debian/changelog matches
> the unpacked source tree
> dpkg-source: info: you can integrate the local changes with dpkg-source
> --commit
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2
>
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage
> --sanitize-env -us -uc -rfakeroot -S' failed to run.
The full build log is available from:
http://qa-logs.debian.net/2023/08/13/mira_4.9.6-10_unstable.log
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: mira
Source-Version: 4.9.6-12
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
mira, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated mira package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 15 Feb 2026 15:27:05 +0100
Source: mira
Architecture: source
Version: 4.9.6-12
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1045311 1127240
Changes:
mira (4.9.6-12) unstable; urgency=medium
.
* d/watch: version=5
* Remove libboost-system-dev from Build-Depends
Closes: #1127240
* Really fix clean target
Closes: #1045311
* Remove old FSF address
* cme fix dpkg-control
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