Your message dated Tue, 26 May 2026 10:08:41 +0000
with message-id <[email protected]>
and subject line Bug#1133341: Removed package(s) from unstable
has caused the Debian Bug report #1089281,
regarding abinit: Supporting rootless builds
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1089281: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1089281
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: abinit
Version: 9.10.4-3
Severity: important
Tags: ftbfs
Justification: FTBFS
X-Debbugs-Cc: [email protected]
User: [email protected]
Usertags: rrr-no-as-default-issue
Dear maintainer,
During a test rebuild for building packages with
`Rules-Requires-Root: no` as the default in `dpkg`,
abinit failed to rebuild.
Log Summary:
-------------------------------------------------------------------------------
[...]
mpifort -I../../shared/common/src/incs -I../../shared/common/src/incs
-I../../shared/common/src/mods -I../../shared/common/src/mods
-I../../src/incs -I../../src/incs -I../../src/mods -I../../src/mods
-I../../shared/libpaw/incs -I../../shared/libpaw/incs
-I../../shared/libpaw/mods -I../../shared/libpaw/mods -I/usr/include -g
-O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -mbranch-protection=standard
-ffree-line-length-none -fallow-argument-mismatch -o mrgscr
mrgscr-mrgscr.o ../../src/70_gw/lib70_gw.a
../../src/69_wfdesc/lib69_wfdesc.a ../../src/67_common/lib67_common.a
../../src/66_wfs/lib66_wfs.a ../../src/66_vdwxc/lib66_vdwxc.a
../../src/66_nonlocal/lib66_nonlocal.a ../../src/65_paw/lib65_paw.a
../../src/64_psp/lib64_psp.a ../../src/62_wvl_wfs/lib62_wvl_wfs.a
../../src/62_poisson/lib62_poisson.a
../../src/62_iowfdenpot/lib62_iowfdenpot.a
../../src/62_ctqmc/lib62_ctqmc.a
../../src/62_cg_noabirule/lib62_cg_noabirule.a
../../src/61_occeig/lib61_occeig.a ../../src/57_iovars/lib57_iovars.a
../../src/57_iopsp_parser/lib57_iopsp_parser.a
../../src/56_xc/lib56_xc.a ../../src/56_recipspace/lib56_recipspace.a
../../src/56_mixing/lib56_mixing.a ../../src/56_io_mpi/lib56_io_mpi.a
../../src/55_abiutil/lib55_abiutil.a
../../src/54_spacepar/lib54_spacepar.a ../../src/53_ffts/lib53_ffts.a
../../src/52_fft_mpi_noabirule/lib52_fft_mpi_noabirule.a
../../src/51_manage_mpi/lib51_manage_mpi.a
../../src/49_gw_toolbox_oop/lib49_gw_toolbox_oop.a
../../src/45_geomoptim/lib45_geomoptim.a
../../src/44_abitypes_defs/lib44_abitypes_defs.a
../../src/44_abitools/lib44_abitools.a
../../src/43_wvl_wrappers/lib43_wvl_wrappers.a
../../src/43_ptgroups/lib43_ptgroups.a
../../src/42_parser/lib42_parser.a
../../src/42_nlstrain/lib42_nlstrain.a
../../src/41_geometry/lib41_geometry.a
../../src/39_libpaw/lib39_libpaw.a
../../src/33_xc_lowlevel/lib33_xc_lowlevel.a
../../src/32_util/lib32_util.a ../../src/29_kpoints/lib29_kpoints.a
../../src/28_numeric_noabirule/lib28_numeric_noabirule.a
../../src/27_toolbox_oop/lib27_toolbox_oop.a
../../src/21_hashfuncs/lib21_hashfuncs.a
../../src/18_timing/lib18_timing.a
../../src/17_yaml_out/lib17_yaml_out.a
../../src/17_libtetra_ext/lib17_libtetra_ext.a
../../src/16_hideleave/lib16_hideleave.a
../../src/14_hidewrite/lib14_hidewrite.a
../../src/12_hide_mpi/lib12_hide_mpi.a
../../src/11_memory_mpi/lib11_memory_mpi.a
../../src/10_defs/lib10_defs.a ../../src/02_clib/lib02_clib.a -lxc
-llapack -lblas -lnetcdff -lnetcdf
-L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lcrypto
-lcurl -lpthread -lsz -lz -ldl -lm
-L/usr/lib/aarch64-linux-gnu/openmpi/lib
-L/usr/lib/gcc/aarch64-linux-gnu/14
-L/usr/lib/gcc/aarch64-linux-gnu/14/../../../aarch64-linux-gnu
-L/usr/lib/gcc/aarch64-linux-gnu/14/../../../../lib
-L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu
-L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/14/../../..
-lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm
-lxc -lnetcdff -lnetcdf -L/usr/lib/aarch64-linux-gnu/hdf5/serial
-lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm -lm
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/98_main'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src'
make[5]: Nothing to be done for 'all-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making all in abichecks
make[4]: Entering directory '/<<PKGBUILDDIR>>/abichecks'
==============================================================================
Keywords to use with the make command for abichecks tests directory:
tests_abirules Launch the abirules tests
Warning: for some of the tests, the file make.log
must be present in the top directory. This means one has
to compile with the command: `make > make.log 2>&1`
tests_buildsys Launch the buildsys tests
tests_libpaw Launch the libpaw tests
==============================================================================
[This file can be found at doc/help_make/help_make_abichecks.txt]
make[4]: Leaving directory '/<<PKGBUILDDIR>>/abichecks'
Making all in doc
make[4]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/doc'
Making all in tests
make[4]: Entering directory '/<<PKGBUILDDIR>>/tests'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/tests'
make[4]: Entering directory '/<<PKGBUILDDIR>>'
make[4]: Leaving directory '/<<PKGBUILDDIR>>'
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build --sourcedirectory=doc
cd doc && make -j8 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
cd doc/theory/ELF && pdflatex -interaction=nonstopmode --shell-escape
wf_elecden_kinden_elf.tex
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live
2025/dev/Debian) (preloaded format=pdflatex)
\write18 enabled.
kpathsea: Running mktexfmt pdflatex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in
precedence order):
mktexfmt: /usr/share/texmf/web2c/fmtutil.cnf
mktexfmt: /usr/share/texlive/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing
changes:
mktexfmt: /nonexistent/.texlive2024/texmf-config/web2c/fmtutil.cnf
/usr/bin/mktexfmt: mkdir(/nonexistent/) failed for tree
/nonexistent/.texlive2024/texmf-var/web2c: Permission denied at
/usr/share/texlive/tlpkg/TeXLive/TLUtils.pm line 1247.
I can't find the format file `pdflatex.fmt'!
make[1]: *** [debian/rules:53: override_dh_auto_build-indep] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:20: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit
status 2
--------------------------------------------------------------------------------
Build finished at 2024-11-15T18:14:53Z
-------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most
relevant part. If required, the full build log is available here:
https://people.debian.org/~nthykier/rrr-no-as-default/logs/972917.gz
You can find common solutions at
https://people.debian.org/~nthykier/rrr-no-as-default/docs/solutions.md
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
If this package is listed in
https://people.debian.org/~nthykier/rrr-no-as-default/docs/static-ownership.list,
then please just set `Rules-Requires-Root: binary-targets` to the source
stanza of `debian/control` as a fix to this bug.
If this package is listed in
https://people.debian.org/~nthykier/rrr-no-as-default/docs/maybe-misbuilds.list,
then the package was deemed at risk for misbuilding (having wrong
ownership) but had a FTBFS problem we tested it. Please test whether the
package works with `Rules-Requires-Root: no` validating that the
resulting deb has the correct ownership for all paths in the deb.
The goal is to have the default changed in `dpkg` either in `Trixie` or
`Forky`, depending on progress and feasibility with the release schedule
for Trixie.
Thanks,
PS: The builds were performed in mid-November. If you fixed the problem
between between then and this bug being filed, then please just close
the bug with the version it was fixed in.
OpenPGP_signature.asc
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Version: 9.10.4-3+rm
Dear submitter,
as the package abinit has just been removed from the Debian archive
unstable we hereby close the associated bug reports. We are sorry
that we couldn't deal with your issue properly.
For details on the removal, please see https://bugs.debian.org/1133341
The version of this package that was in Debian prior to this removal
can still be found using https://snapshot.debian.org/.
Please note that the changes have been done on the master archive and
will not propagate to any mirrors until the next dinstall run at the
earliest.
This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
[email protected].
Debian distribution maintenance software
pp.
Thorsten Alteholz (the ftpmaster behind the curtain)
--- End Message ---
