Your message dated Sat, 18 Jul 2026 05:48:45 +0000
with message-id <[email protected]>
and subject line Bug#1131795: fixed in metastudent 2.0.1-11
has caused the Debian Bug report #1131795,
regarding metastudent: autopkgtest failure with Python 3.14
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1131795: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1131795
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: metastudent
Version: 2.0.1-10
Severity: important
Tags: forky sid
User: [email protected]
Usertags: python3.14
Hi Maintainer
The autopkgtests of this package failed in Ubuntu with Python 3.14 as
the default version. I've copied what I hope is the relevant part of
the log below.
Regards
Graham
275s ====== Metastudent finished ======
275s
276s multiprocessing.pool.RemoteTraceback:
276s """
276s Traceback (most recent call last):
276s File "/usr/lib/python3.14/multiprocessing/pool.py", line 125, in worker
276s result = (True, func(*args, **kwds))
276s ~~~~^^^^^^^^^^^^^^^
276s File "/usr/lib/python3.14/multiprocessing/pool.py", line 48, in mapstar
276s return list(map(*args))
276s File "/usr/lib/python3/dist-packages/metastudentPkg/commons.py",
line 142, in makeCompletePrediction
276s key, val) in termsToScores.items() if key in go.fullClosureKeys])
276s ^^^^^^^^^^^^^^^^^^
276s AttributeError: 'NoneType' object has no attribute 'fullClosureKeys'
276s """
276s
276s The above exception was the direct cause of the following exception:
276s
276s Traceback (most recent call last):
276s File "/usr/bin/metastudent", line 772, in <module>
276s runIt(tempfile, inputFastaFilePath, outputFilePath,
outputBlast, blastKickstartDatabasePaths,
276s
~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
276s ontologies, blastOnly, keepTemp, allPreds, debug,
noNames, withImages)
276s
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
276s File "/usr/bin/metastudent", line 218, in runIt
276s predsDict[methodChar].propagatePrediction()
276s ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^
276s File "/usr/lib/python3/dist-packages/metastudentPkg/commons.py",
line 350, in propagatePrediction
276s results = p.map(makeCompletePrediction, inputs, chunksize=20)
276s File "/usr/lib/python3.14/multiprocessing/pool.py", line 367, in map
276s return self._map_async(func, iterable, mapstar, chunksize).get()
276s ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^
276s File "/usr/lib/python3.14/multiprocessing/pool.py", line 774, in get
276s raise self._value
276s AttributeError: 'NoneType' object has no attribute 'fullClosureKeys'
276s /tmp/autopkgtest.K5Mo4r/wrapper.sh: Killing leaked background
processes: 5688
276s PID TTY STAT TIME COMMAND
276s /tmp/autopkgtest.K5Mo4r/wrapper.sh: 244: kill: No such process
276s
276s /tmp/autopkgtest.K5Mo4r/wrapper.sh: 246: kill: No such process
276s
276s autopkgtest [16:10:02]: test run-unit-test: -----------------------]
--- End Message ---
--- Begin Message ---
Source: metastudent
Source-Version: 2.0.1-11
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
metastudent, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated metastudent package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sat, 18 Jul 2026 07:24:16 +0200
Source: metastudent
Architecture: source
Version: 2.0.1-11
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1131795 1141363
Changes:
metastudent (2.0.1-11) unstable; urgency=medium
.
* Team upload.
.
[ Michael R. Crusoe ]
* d/control: consolidate all build dependencies (no need for a separate
Build-Depends-Indep).
* Switch to using dh-sequence-{javahelper,python3}
* d/clean: use this instead of a dh_auto_clean override in d/rules
.
[ Andreas Tille ]
* Force fork start method for the propagatePrediction worker pool
Closes: #1131795
* Use Github as Homepage
Closes: #1141363
* debian/upstream/signing-key.asc: removed
* d/watch: Upstream seems to be inactive, but point watch file to Github
anyway
* Remove redundant Priority: optional from source stanza.
* Standards-Version: 4.7.4
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