Bug#1133549: marked as done (mia: ftbfs with GCC-16)

Mon, 03 Aug 2026 23:35:22 -0700 

Your message dated Tue, 04 Aug 2026 06:33:49 +0000
with message-id <[email protected]>
and subject line Bug#1133549: fixed in mia 2.4.7-19
has caused the Debian Bug report #1133549,
regarding mia: ftbfs with GCC-16
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)


-- 
1133549: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1133549
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message --- 
Package: src:mia
Version: 2.4.7-18
Severity: important
Tags: sid forky ftbfs
User: [email protected]
Usertags: ftbfs-gcc-16

Hi,

mia fails to build in a test rebuild on at least amd64 and arm64 with
gcc-16/g++-16, but builds properly with gcc-15/g++-15. The severity of this
report will be raised before the forky release.

The full build log can be found at:
https://people.debian.org/~ema/gcc-16-rebuilds/output-1/mia_arm64.build.xz

The last lines of the build log are at the end of this report.

To build with GCC 16, either set CC=gcc-16 CXX=g++-16 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t=experimental install g++ 

Common build failures include unused (but set) variables, array subscripts
partly outside array bounds, and new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-16/porting_to.html

Please only close this issue after double-checking that the package can be
built correctly with GCC 16.

Please do not reassign this bug to another package. If a fix in another package
is required, then file a bug for the other package (or clone), and mark this
bug as blocked by the bug in the other package.

[...]


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/usr/lib/aarch64-linux-gnu/libboost_unit_test_framework.so.1.90.0 -lgsl 
-lgslcblas -lm /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.90.0 
/usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.90.0 -lpthread 
/usr/lib/aarch64-linux-gnu/libdl.a -lfftw3f -lxml2
make[4]: Leaving directory 
'/build/reproducible-path/mia-2.4.7/obj-aarch64-linux-gnu'
[ 82%] Built target test-attributes
[ 82%] Linking CXX executable test-3dimage-filter-convert
cd /build/reproducible-path/mia-2.4.7/obj-aarch64-linux-gnu/mia/3d/filter && 
/usr/bin/cmake -E cmake_link_script 
CMakeFiles/test-3dimage-filter-convert.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mia-2.4.7=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -mbranch-protection=standard -Wdate-time 
-D_FORTIFY_SOURCE=2 -DH5Oget_info_by_name_vers=1 -DH5O_info_t_vers=1   
-fvisibility=hidden -Wl,-z,relro -Wl,-z,now -fvisibility=hidden 
-Wl,--dependency-file=CMakeFiles/test-3dimage-filter-convert.dir/link.d 
"CMakeFiles/test-3dimage-filter-convert.dir/test_convert.cc.o" 
"CMakeFiles/3dimage-filter-convert-common.dir/convert.cc.o" -o 
test-3dimage-filter-convert  
-Wl,-rpath,"\$ORIGIN/../:\$ORIGIN/../../2d:\$ORIGIN/../../core" 
../libmia3dtest-2.4.so.6.0.1 ../libmia3d-2.4.so.6.0.1 
../../2d/libmia2dtest-2.4.so.6.0.1 
/usr/lib/aarch64-linux-gnu/libboost_unit_test_framework.so.1.90.0 
../../2d/libmia2d-2.4.so.6.0.1 ../../core/libmiacore-2.4.so.6.0.1 -lgsl 
-lgslcblas -lm /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.90.0 
/usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.90.0 -lpthread 
/usr/lib/aarch64-linux-gnu/libdl.a -lfftw3f -lxml2
make[4]: Leaving directory 
'/build/reproducible-path/mia-2.4.7/obj-aarch64-linux-gnu'
[ 82%] Built target test-3dimage-filter-convert
make[3]: Leaving directory 
'/build/reproducible-path/mia-2.4.7/obj-aarch64-linux-gnu'
make[2]: *** [Makefile:149: all] Error 2
make[2]: Leaving directory 
'/build/reproducible-path/mia-2.4.7/obj-aarch64-linux-gnu'
dh_auto_build: error: cd obj-aarch64-linux-gnu && make -j128 INSTALL="install 
--strip-program=true" VERBOSE=1 returned exit code 2
make[1]: *** [debian/rules:60: override_dh_auto_build-arch] Error 25
make[1]: Leaving directory '/build/reproducible-path/mia-2.4.7'
make: *** [debian/rules:24: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit 
status 2

--- End Message ---
--- Begin Message --- 
Source: mia
Source-Version: 2.4.7-19
Done: Yavor Doganov <[email protected]>

We believe that the bug you reported is fixed in the latest version of
mia, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Yavor Doganov <[email protected]> (supplier of updated mia package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Mon, 03 Aug 2026 18:35:35 +0300
Source: mia
Architecture: source
Version: 2.4.7-19
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<[email protected]>
Changed-By: Yavor Doganov <[email protected]>
Closes: 1133549
Changes:
 mia (2.4.7-19) unstable; urgency=medium
 .
   * Team upload.
   * debian/patches/gcc-16.patch: New; fix FTBFS with GCC 16 (Closes:
     #1133549).
   * debian/control (Build-Depends): Switch to debhelper compat 14.
     (Depends): Remove ${misc:Depends} and ${shlibs:Depends}.
     (Pre-Depends): Remove ${misc:Pre-Depends}.
     (Standards-Version): Claim compliance with 4.7.4; no changes needed.
   * debian/rules (override_dh_auto_configure): Don't pass
     -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON; now it's done by default.
     (override_dh_auto_build-indep): Also run dh_auto_build without
     arguments; fixes the arch:all build with current cmake.
     (override_dh_auto_install-indep): Remove; no longer needed.
   * debian/libmia-2.4-4.lintian-overrides: Remove exit-in-shared-library;
     this tag has been removed in Lintian.
   * debian/copyright: Update copyright years for Debian packaging.
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