Source: rggobi
Version: 2.1.17-1
Severity: important
On Fri, Mar 30, 2012 at 10:56:35AM +0000, buildd on zappa wrote:
> sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zappa.debian.org
>
> ╔══════════════════════════════════════════════════════════════════════════════╗
> ║ rggobi 2.1.17-1 (s390x) 30 Mar 2012
> 10:52 ║
> ╚══════════════════════════════════════════════════════════════════════════════╝
[…]
> gcc -std=gnu99 -shared -o rggobi.so RSEval.o brush.o colorSchemes.o
> conversion.o data.o dataset.o display.o displays.o edges.o ggobi.o identify.o
> init.o io.o keyHandlers.o longitudinal.o modes.o plot.o plots.o plugins.o
> print.o session.o smooth.o ui.o utils.o -pthread -lggobi -lgtk-x11-2.0 -lxml2
> -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0
> -lgdk_pixbuf-2.0 -lcairo -lpango-1.0 -lfreetype -lfontconfig -lgobject-2.0
> -lgmodule-2.0 -lrt -lglib-2.0 -L/usr/lib/R/lib -lR
> make[1]: Leaving directory
> `/build/buildd-rggobi_2.1.17-1-s390x-CN0twb/rggobi-2.1.17/src'
> make[1]: Entering directory
> `/build/buildd-rggobi_2.1.17-1-s390x-CN0twb/rggobi-2.1.17/src'
> make[1]: Leaving directory
> `/build/buildd-rggobi_2.1.17-1-s390x-CN0twb/rggobi-2.1.17/src'
> installing to
> /build/buildd-rggobi_2.1.17-1-s390x-CN0twb/rggobi-2.1.17/debian/r-cran-rggobi/usr/lib/R/site-library/rggobi/libs
> ** R
> ** data
> ** moving datasets to lazyload DB
> ** demo
> ** preparing package for lazy loading
>
> *** caught segfault ***
> address 0x6373000080004000, cause 'memory not mapped'
>
> Traceback:
> 1: .C("R_gtkInit", length(args), x = args, success = logical(1), PACKAGE
> = "RGtk2")
> 2: gtkInit(args)
> 3: fun(libname, pkgname)
> 4: doTryCatch(return(expr), name, parentenv, handler)
> 5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 6: tryCatchList(expr, classes, parentenv, handlers)
> 7: tryCatch(fun(libname, pkgname), error = identity)
> 8: runHook(".onLoad", env, package.lib, package)
> 9: loadNamespace(i, c(lib.loc, .libPaths()))
> 10: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths())))
> 11: loadNamespace(package, lib.loc, keep.source, partial = TRUE)
> 12: withCallingHandlers(expr, packageStartupMessage = function(c)
> invokeRestart("muffleMessage"))
> 13: suppressPackageStartupMessages(loadNamespace(package, lib.loc,
> keep.source, partial = TRUE))
> 14: code2LazyLoadDB(package, lib.loc = lib.loc, keep.source = keep.source,
> compress = compress)
> 15: makeLazyLoading(pkg_name, lib, keep.source = keep.source)
> 16: doTryCatch(return(expr), name, parentenv, handler)
> 17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 18: tryCatchList(expr, classes, parentenv, handlers)
> 19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
> (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
> call <- sys.call(-4L) dcall <- deparse(call)[1L] prefix
> <- paste("Error in", dcall, ": ") LONG <- 75L msg <-
> conditionMessage(e) sm <- strsplit(msg, "\n")[[1L]] w <- 14L +
> nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w))
> w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
> type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")
> } else prefix <- "Error : " msg <- paste0(prefix,
> conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if
> (!silent && identical(getOption("show.error.messages"), TRUE)) {
> cat(msg, file = stderr()) .Internal(printDeferredWarnings()) }
> invisible(structure(msg, class = "try-error", condition = e))})
> 20: try({ suppressPackageStartupMessages(.getRequiredPackages(quietly =
> TRUE)) makeLazyLoading(pkg_name, lib, keep.source = keep.source)})
> 21: do_install_source(pkg_name, instdir, pkg, desc)
> 22: do_install(pkg)
> 23: tools:::.install_packages()
> aborting ...
> Segmentation fault
> make: *** [R_any_arch] Error 139
> dpkg-buildpackage: error: fakeroot debian/rules binary-arch gave error exit
> status 2
> ────────────────────────────────────────────────────────────────────────────────
> Build finished at 20120330-1056
> FAILED [dpkg-buildpackage died]
> ────────────────────────────────────────────────────────────────────────────────
> Purging
> /var/lib/schroot/mount/sid-s390x-sbuild-1b0a7a5c-44d7-4dcc-b102-c59257cac166/build/buildd-rggobi_2.1.17-1-s390x-CN0twb
> Not cleaning session: cloned chroot in use
>
> ┌──────────────────────────────────────────────────────────────────────────────┐
> │ Summary
> │
> └──────────────────────────────────────────────────────────────────────────────┘
>
> Architecture: s390x
> Build-Space: 2708
> Build-Time: 60
> Distribution: sid
> Fail-Stage: build
> Install-Time: 129
> Job: rggobi_2.1.17-1
> Package: rggobi
> Package-Time: 231
> Source-Version: 2.1.17-1
> Space: 2708
> Status: attempted
> Version: 2.1.17-1
> ────────────────────────────────────────────────────────────────────────────────
> Finished at 20120330-1056
> Build needed 00:03:51, 2708k disc space
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