> On Fri, Jul 20, 2012 at 05:52:49PM +0900, Charles Plessy wrote: > > Package: qiime > > Version: 1.5.0-1 > > Severity: important > > > > Hi all, > > > > it looks like /usr/lib/qiime/bin/subsample_fasta.py needs a python > > library that is not in python 2.6. > > > > $ /usr/lib/qiime/bin/subsample_fasta.py > > Traceback (most recent call last): > > File "/usr/lib/qiime/bin/subsample_fasta.py", line 15, in <module> > > from qiime.util import parse_command_line_parameters, > > get_options_lookup,\ > > File "/usr/lib/python2.6/dist-packages/qiime/util.py", line 25, in > > <module> > > from collections import defaultdict, Counter > > ImportError: cannot import name Counter > > > > After changing its first line to '#!/usr/bin/python2.7', the error > > dissapeared.
Le Fri, Jul 20, 2012 at 11:13:57AM +0200, Andreas Tille a écrit : > Hi, > > would you mind reporting this upstream? Hi Andreas, I do not propose to change the line to '#!/usr/bin/python2.7' as it would prevent to run qiime on higher versions. I just mentionned it as a proof that it works with 2.7 and not with 2.6. I suppose that it has to be fixed in the Debian package, but I am too much of a beginner in Python to propose a solution. Cheers, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
