Le Wed, Jul 02, 2014 at 12:30:24PM +0000, Aleksandar Zlicic a écrit : > Package: samtools > Version: 0.1.19-1 > Tags: sid patch > Severity: important > User: debian-mips-dev-disc...@lists.alioth.debian.org > Usertags: mips-patch > > 'python-pysam' package FTBFS on mips/mipsel due to issues in 'samtools' > package. > > Build log for 'python-pysam' on mips: > https://buildd.debian.org/status/fetch.php?pkg=python-pysam&arch=mips&ver=0.7.7-1&stamp=1397894446 > Build log for 'python-pysam' on mipsel: > https://buildd.debian.org/status/fetch.php?pkg=python-pysam&arch=mipsel&ver=0.7.7-1&stamp=1397887877 > > Output of samtools executable from samtools package is used as a reference > during tests in python-pysam (its output is compared with output from > pysam python module), but samtools has both unaligned memory access > and system endianness issues. > > I have attached patches that fix this. With these patches applied to samtools, > python-pysam builds fine.
Hi Aleksandar, I admit that I am a bit worried of applying a patch that I am not able to review. Could you ask upstream (https://github.com/samtools/samtools) to have a look ? Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org