reopen 776318
thanks
Hi James,
I insist that the latest change in uscan / mk-origtargz is a step
backwards since it results in errors when not needed and moreover no
exxor occured in previous versions (namely 2.14.10 which I tested
without any problem). I have a new occurance of this problem in
Vcs-Git: git://anonscm.debian.org/debian-med/trinityrnaseq.git
d/copyright says:
Files-Excluded: trinity-plugins/jellyfish-*.tar.gz
util/support_scripts/ExitTester.jar
Butterfly/src/lib/*.jar
Butterfly/*.jar
Butterfly/prev_vers
trinity-plugins/rsem*.tar.gz
trinity-plugins/Trimmomatic*
$ LC_ALL=C mk-origtargz ../trinityrnaseq-2.0.3.tar.gz
tar: trinityrnaseq-2.0.3/Butterfly/src/lib/jung-graph-impl-2.0.1.jar: Not found
in archive
tar: trinityrnaseq-2.0.3/Butterfly/src/lib/jung-api-2.0.1.jar: Not found in
archive
tar: trinityrnaseq-2.0.3/Butterfly/src/lib/jung-algorithms-2.0.1.jar: Not found
in archive
tar: trinityrnaseq-2.0.3/Butterfly/src/lib/java-getopt-1.0.13.jar: Not found in
archive
tar: trinityrnaseq-2.0.3/Butterfly/src/lib/collections-generic-4.01.jar: Not
found in archive
tar: trinityrnaseq-2.0.3/Butterfly/src/lib/Jaligner.jar: Not found in archive
tar: trinityrnaseq-2.0.3/Butterfly/prev_vers/Butterfly_r2013_08_14.jar: Not
found in archive
tar: Exiting with failure status due to previous errors
mk-origtargz: error: tar --delete --file ../trinityrnaseq_2.0.3+dfsg.orig.tar
trinityrnaseq-2.0.3/util/support_scripts/ExitTester.jar
trinityrnaseq-2.0.3/trinity-plugins/rsem-1.2.19.tar.gz
trinityrnaseq-2.0.3/trinity-plugins/jellyfish-2.1.4.tar.gz
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/trimmomatic.jar
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/trimmomatic-0.32.jar
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/adapters/TruSeq3-SE.fa
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/adapters/TruSeq3-PE.fa
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/adapters/TruSeq3-PE-2.fa
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/adapters/TruSeq2-SE.fa
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/adapters/TruSeq2-PE.fa
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/adapters/NexteraPE-PE.fa
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/adapters/
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/LICENSE
trinityrnaseq-2.0.3/trinity-plugins/Trimmomatic-0.32/
trinityrnaseq-2.0.3/Butterfly/src/lib/jung-graph-impl-2.0.1.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/jung-graph-impl-2.0.1.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/jung-api-2.0.1.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/jung-api-2.0.1.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/jung-algorithms-2.0.1.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/jung-algorithms-2.0.1.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/java-getopt-1.0.13.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/java-getopt-1.0.13.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/collections-generic-4.01.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/collections-generic-4.01.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/Jaligner.jar
trinityrnaseq-2.0.3/Butterfly/src/lib/Jaligner.jar
trinityrnaseq-2.0.3/Butterfly/prev_vers/Butterfly_r2013_08_14.jar
trinityrnaseq-2.0.3/Butterfly/prev_vers/Butterfly_r2013_08_14.jar
trinityrnaseq-2.0.3/Butterfly/prev_vers/
trinityrnaseq-2.0.3/Butterfly/Butterfly.jar gave error exit status 2
Please make sure that the `tar --delete` command does not get any
duplicated string even if for whatever strange reason two regexps
might match (even if I personally do not think they do after the
original specification.
Kind regards
Andreas.
On Mon, Jan 26, 2015 at 09:29:44PM +0100, Andreas Tille wrote:
> thanks for your quick reply.
>
> > They're mentioned twice because the Files-Excluded field in d/copyright
> > lists them twice:
> >
> > Files-Excluded:
> > */System/*/*.js
> > */System/*/*/*.js
> >
> > The * in a Files (and therefore Files-Excluded) field in d/copyright
> > is recursive:
> >
> > * Only the wildcards * and ? apply; the former matches any number of
> > characters (including none), the latter a single character. Both
> > match
> > slashs (/) and leading dots, unlike shell globs.
>
> Hmmm, aren't Files-Excluded shell globs? At least I consider it the
> outcome of the discussion (and thus I created the expression above which
> worked at least until Fri, 10 Oct 2014 14:01:12 +0200 (latest changelog
> entry).
>
> > The pattern *.in
> > therefore matches any file whose name ends in .in anywhere in the
> > source tree, not just at the top level.
>
> While I could cope with this change I wonder whether it would not be
> more safe in any case if
>
> Files-Excluded: a.x b.x a.x
>
> would simply remove files a.x and b.x instead of creating an error. A
> warning would be fine, thought.
>
> I can confirm that mk-origtargz works nicely after removing
> */System/*/*/*.js
> so it behaves in fact as you described.
>
> Kind regards
>
> Andreas.
>
> --
> http://fam-tille.de
--
http://fam-tille.de
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