Package: ncbi-blast+
Version: 2.2.30-3
Severity: serious
User: [email protected]
Usertags: ftbfs-gcc-5
This package fails to compile with GCC 5 on ARM64. The error doesn't
show up on amd64.
> sbuild (Debian sbuild) 0.64.1 (13 Oct 2013) on m400-c4n1.hlinux.usa.hp.com
...
> /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2
> -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG
> -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE
> -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE
> -I/build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/BUILD/inc
> -I/build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/include
> /build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/src/util/histogram_binning.cpp
> -o histogram_binning.o
> In file included from
> /build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/include/util/bitset/bmutil.h:30:0,
> from
> /build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/src/util/histogram_binning.cpp:43:
> /build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/include/util/bitset/bmconst.h:
> In instantiation of 'const char bm::first_bit_table<true>::_idx [256]':
> /build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/include/util/bitset/bmutil.h:147:56:
> required from here
> /build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/include/util/bitset/bmconst.h:154:12:
> error: narrowing conversion of '-1' from 'int' to 'char' inside { }
> [-Wnarrowing]
> const char first_bit_table<T>::_idx[256] = {
> ^
> /build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/BUILD/build/Makefile.rules:52:
> recipe for target 'histogram_binning.o' failed
> make[3]: *** [histogram_binning.o] Error 1
> make[3]: Leaving directory
> '/build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/BUILD/build/util'
> FAILED: src/util/Makefile.util.lib
> make[3]: Entering directory
> '/build/ncbi-blast+-mkG3Rd/ncbi-blast+-2.2.30/c++/BUILD/build/util'
--
Martin Michlmayr
Linux for HP Helion OpenStack, Hewlett-Packard
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