Thanks for clarifying. It sounds like the formatter is retrieving actual data, not just speculatively setting up a connection, so enabling offline operation won't be as easy as I'd hoped.
Yann Dumont <[email protected]> writes: > Well, you may not have assumed so... I run this command in another tab of > my console (echo of the variable returned nothing, I was kind of suspicion > there). > > Now I have done it correctly (echo returns no), but it doesn't change the > result : I still have the warnings and the empty result file. > > If it can help, when I run formatter with net on, it seem to be downloading > something (about 500 Ko-2Mo, looking to traffic curve). > > 2015-07-15 17:42 GMT+02:00 Aaron M. Ucko <[email protected]>: > >> Yes, that's what I meant, assuming you proceeded to run blast_formatter >> from the same shell session. I'll take a closer look when I get a chance. >> >> -- Aaron >> >> Yann Dumont <[email protected]> writes: >> >> > I am not sure I have done what you asked correctly. I am not very >> familiar >> > with environnement variables. I just run >> > >> > $ export NCBI_CONFIG__GENBANK__PREOPEN=no >> > >> > without rebooting, and it did not change anything. >> > >> > 2015-07-15 16:57 GMT+02:00 Aaron M. Ucko <[email protected]>: >> > >> >> Yann Dumont <[email protected]> writes: >> >> >> >> > I am currently have some connection issues, so I realized that >> >> blast_formatter >> >> > failled when internet connection is off. >> >> >> >> I'm sorry to hear that. Does the environment setting >> >> >> >> NCBI_CONFIG__GENBANK__PREOPEN=no >> >> >> >> help? >> >> >> >> -- >> >> Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org) >> >> http://www.mit.edu/~amu/ | >> >> http://stuff.mit.edu/cgi/finger/[email protected] -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
