Hi, I have cloned bug #848758 where I suggested to revert the python-numpy transition which other posters agreed upon. Besides breaking python-skbio I spotted another package python-skimage which fails with:
====================================================================== ERROR: skimage.filters.rank.tests.test_rank.test_all ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest self.test(*self.arg) File "/build/skimage-0.12.3/debian/tmp/usr/lib/python2.7/dist-packages/skimage/filters/rank/tests/test_rank.py", line 16, in test_all check_all() File "/build/skimage-0.12.3/debian/tmp/usr/lib/python2.7/dist-packages/skimage/_shared/testing.py", line 232, in inner result = func(*args, **kwargs) File "/build/skimage-0.12.3/debian/tmp/usr/lib/python2.7/dist-packages/skimage/filters/rank/tests/test_rank.py", line 89, in check_all rank.windowed_histogram(image, selem)) File "/build/skimage-0.12.3/debian/tmp/usr/lib/python2.7/dist-packages/skimage/filters/rank/generic.py", line 986, in windowed_histogram pixel_size=n_bins) File "/build/skimage-0.12.3/debian/tmp/usr/lib/python2.7/dist-packages/skimage/filters/rank/generic.py", line 90, in _apply_vector_per_pixel pixel_size=pixel_size) File "/build/skimage-0.12.3/debian/tmp/usr/lib/python2.7/dist-packages/skimage/filters/rank/generic.py", line 53, in _handle_input out = np.empty(image.shape+(pixel_size,), dtype=out_dtype) TypeError: 'numpy.float64' object cannot be interpreted as an index ---------------------------------------------------------------------- Ran 1383 tests in 181.697s I'll leave it to the reader to consider lowering the severity of this bug and risking that python-skimage (and possibly other packages) will not reach the next stable release. While python-skbio is a package of minor importance python-skimage has several reverse depends and should be saved. Kind regards Andreas. -- http://fam-tille.de