Source: med-fichier Version: 3.0.6-11 Severity: grave Justification: renders package unusable
Hi, From the Salome Platform support forum [1]: > Problems with Salome and Code Saturne in Debian > Posted by Elektrix at January 03. 2017 > > Hello all, > > I'm trying to set up a CFD case with Salome, export the mesh in a MED file > and then process it with Code Saturne. CS doesn't read the MED file and gives > the error in the preprocessing stage: > > _MEDdatasetRd.c [139] : Erreur à la lecture du dataset > _MEDdatasetRd.c [139] : COO > HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0: > #000: ../../../src/H5Dio.c line 170 in H5Dread(): can't read data > major: Dataset > minor: Read failed > #001: ../../../src/H5Dio.c line 418 in H5D__read(): unable to set up type > info > major: Dataset > minor: Unable to initialize object > #002: ../../../src/H5Dio.c line 953 in H5D__typeinfo_init(): not a datatype > major: Invalid arguments to routine > minor: Inappropriate type > _MEDdatasetRd.c [142] : _dataset = 2 > _MEDdatasetRd.c [143] : _i = 0 > _MEDdatasetRd.c [144] : (*filter).memspace[_i] = 2 > _MEDdatasetRd.c [145] : (*filter).diskspace[_i] = 3 > _MEDmeshAdvancedRd30.c [462] : Erreur à la lecture du dataset > _MEDmeshAdvancedRd30.c [462] : > _MEDmeshAdvancedRd30.c [463] : meshname = "Mesh_water" > _MEDmeshAdvancedRd30.c [463] : numit = -1 > _MEDmeshAdvancedRd30.c [463] : numdt = -1 > _MEDmeshAdvancedRd30.c [463] : _datagroupname2 = "NOE" > _MEDmeshAdvancedRd30.c [464] : _datagroupname3 = "" > _MEDmeshAdvancedRd30.c [464] : _profilename = "MED_NO_PROFILE_INTERNAL" > > The problem can be because I installed Salome from the SALOME-7.6.0-DB07.tgz > archive whilst Code Saturne is a Debian package and is installed via the > Debian package system which is much easier than installing the original > package. So the med and hdf5 libraries of CS come from the Debian > repositories. I can't use newer versions of Salome (7.7.1 or 7.8.0) as they > produce MED3.1 files but my CS reads only MED3.0 files. > > The details of my machine: > > Debian stretch (testing) on AMD64 > > Salome 7.6.0 from SALOME-7.6.0-DB07.tgz > > Code Saturne 4.3 Debian package > > libmed 3.0.6-10.1 Debian package > > hdf5 1.10.0 Debian package > > Not knowing if this problem comes from how I create the mesh I tried to run > one of the test cases from the Code Saturne tutorials but ran into other > problems. > > If you need any other information pleas let me know. Any hint on how to go > further is very welcome. > > Best regards > > Elektrix .... > Re: Problems with Salome and Code Saturne in Debian > Posted by Yvan Fournier at Monday 16:21 > > Hello, > > I was contacted by the Debian maintainer relative to this, so it seems the > bug was reported. > > The root problem is that the MED library is not compatible with HDF5 1.10 > yet. So reverting to HDF5 1.8 as indicated is the solution for now, but the > better solution would be for MED to handle compatibility with both HDF5 1.8 > and HDF5 1.10 (or at least 1.10 for future versions). > > Best regards, > > Yvan [1] http://www.salome-platform.org/forum/forum_9/122041955 Thanks, _g.
