Source: ariba Version: 2.10.0+ds-1 Severity: serious https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/ariba.html
... ====================================================================== FAIL: Test run_bowtie2 unsorted ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/1st/ariba-2.10.0+ds/ariba/tests/mapping_test.py", line 62, in test_run_bowtie2 self.assertListEqual(expected, got) AssertionError: Lists differ: [('1', 99, 'ref', 0, [(4, 5), (0, 20)], 'AGCCCTC[857 chars]AT')] != [('1', 153, 'ref', 30, [(0, 25)], 'AGGATACAGATCT[795 chars]AT')] First differing element 0: ('1', 99, 'ref', 0, [(4, 5), (0, 20)], 'AGCCCTCCACAGGATGGTGGTATAC') ('1', 153, 'ref', 30, [(0, 25)], 'AGGATACAGATCTTGTGGGAAAGGT') - [('1', 99, 'ref', 0, [(4, 5), (0, 20)], 'AGCCCTCCACAGGATGGTGGTATAC'), - ('1', 147, 'ref', 30, [(0, 25)], 'AGGATACAGATCTTGTGGGAAAGGT'), ? ^ ^^ + [('1', 153, 'ref', 30, [(0, 25)], 'AGGATACAGATCTTGTGGGAAAGGT'), ? ^ ^^ + ('1', 101, None, 30, [], 'AGCCCTCCACAGGATGGTGGTATAC'), - ('2', 99, 'ref', 124, [(0, 25)], 'TAATGTTCTTAGGGCTTACCATAGA'), ? ^^ + ('2', 73, 'ref', 124, [(0, 25)], 'TAATGTTCTTAGGGCTTACCATAGA'), ? ^^ - ('2', 147, 'ref', 170, [(0, 20), (4, 5)], 'TCCACCTTAGCTAAGCGCAGACTCG'), + ('2', 133, None, 124, [], 'CGAGTCTGCGCTTAGCTAAGGTGGA'), ('3', 73, 'ref', 86, [(0, 25)], 'TCGGGTCTGTACAAGGACGGATGGT'), ('3', 133, None, 86, [], 'CGTACTGACTGACTGACGTACTGCA'), ('4', 99, 'ref', 55, [(0, 25)], 'CCGCCGGGAAGTCCTTCTGTCGTGC'), ('4', 147, 'ref', 136, [(0, 25)], 'GGCTTACCATAGAGGTACACTAAAA'), - ('5', 99, 'ref', 0, [(4, 2), (0, 23)], 'CCTCCACAGGATGGTGGTATACCTG'), ? ^^ ^^ -- ^ --------------- + ('5', 77, None, -1, [], 'CCTCCACAGGATGGTGGTATACCTG'), ? ^^ ^^^ ^^ - ('5', 147, 'ref', 166, [(0, 24), (4, 1)], 'TTCATCCACCTTAGCTAAGCGCAGA'), + ('5', 141, None, -1, [], 'TCTGCGCTTAGCTAAGGTGGATGAA'), ('6', 77, None, -1, [], 'CAGTTGCATGACGTCATGCAGTCAT'), ('6', 141, None, -1, [], 'AATGAGTATGATGAGTAATGGTATG'), ('7', 99, 'ref', 56, [(4, 1), (0, 23), (4, 1)], 'ACGCCGGGAAGTCCTTCTGTCGTGT'), ('7', 147, 'ref', 136, [(0, 24), (4, 1)], 'GGCTTACCATAGAGGTACACTAAAT')] ====================================================================== FAIL: Test run_bowtie2 sorted ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/1st/ariba-2.10.0+ds/ariba/tests/mapping_test.py", line 105, in test_run_bowtie2_and_sort self.assertListEqual(expected, got) AssertionError: Lists differ: [('1', 99, 'ref', 0, [(4, 5), (0, 20)], 'AGCCCTC[857 chars]TG')] != [('1', 101, None, 30, [], 'AGCCCTCCACAGGATGGTGGT[795 chars]TG')] First differing element 0: ('1', 99, 'ref', 0, [(4, 5), (0, 20)], 'AGCCCTCCACAGGATGGTGGTATAC') ('1', 101, None, 30, [], 'AGCCCTCCACAGGATGGTGGTATAC') Diff is 1434 characters long. Set self.maxDiff to None to see it. ---------------------------------------------------------------------- Ran 335 tests in 173.301s FAILED (failures=2) debian/rules:23: recipe for target 'override_dh_auto_test' failed make[1]: *** [override_dh_auto_test] Error 1