FYI, in building +dfsg-9 we are seeing new bus errors on armhf (which previously passed the tests) https://buildd.debian.org/status/logs.php?arch=armhf&pkg=seqan2
https://buildd.debian.org/status/fetch.php?pkg=seqan2&arch=armhf&ver=2.4.0%2Bdfsg-9&stamp=1544194851&raw=0 And on mips there is a new test failure (tests previously passed here): https://buildd.debian.org/status/fetch.php?pkg=seqan2&arch=mips&ver=2.4.0%2Bdfsg-9&stamp=1544151238&raw=0 Given that these architectures (and sparc64) previously built fine for Debian, I suggest we revert this patch for now. === armel bus errors: === 39/400 Test #46: test_test_index_crosscompare_dna ..................................................Bus error***Exception: 0.01 sec TEST SUITE test_index SEQAN_ENABLE_DEBUG == 1 SEQAN_ENABLE_TESTING == 1 SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" SEQAN_ASYNC_IO == 1 testIndexCrossCompareDna OK 46/400 Test #52: test_test_index_fm_rank_dictionary ................................................Bus error***Exception: 0.01 sec TEST SUITE tests SEQAN_ENABLE_DEBUG == 1 SEQAN_ENABLE_TESTING == 1 SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" SEQAN_ASYNC_IO == 1 RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Naive<void, seqan::RDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK === mips test failure === 5/397 Test #7: test_align_parallel_data_structures ...............................................Child aborted***Exception: 0.10 sec TEST SUITE test_align_parallel_data_structures SEQAN_ENABLE_DEBUG == 1 SEQAN_ENABLE_TESTING == 1 SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" SEQAN_ASYNC_IO == 1 test_align_parallel_wavefront_task_scheduler_construct OK test_align_parallel_wavefront_task_scheduler_async OK test_align_parallel_wavefront_alignment_scheduler_construct OK test_align_parallel_wavefront_alignment_scheduler_async OK double free or corruption (out)
