Package: patsy
Version: 0.5.0+git13-g54dcf7b-1
Severity: normal
Tags: patch
User: ubuntu-de...@lists.ubuntu.com
Usertags: origin-ubuntu eoan ubuntu-patch
Dear maintainers,
As you know, we are in the process of deprecating python2 in Debian for the
next release. In Ubuntu, I've identified that it may be useful to
accelerate this deprecation for pandas and its reverse-dependencies, because
the pandas tests appear to have bit-rotted for python2 on one architecture,
and it would be better to remove the python2 bits rather than invest in
fixing them.
patsy is a package that build-depends on python-pandas, so I've gone ahead
and uploaded the attached patch to Ubuntu which drops the python2 module.
python-patsy has reverse-(build-)depends of seaborn and statsmodels, whose
python2 removal bugs are filed as bug #934852 and bug #934870. Upload of
this change to Debian should probably wait for resolution of those two bugs.
Thanks for considering,
--
Steve Langasek Give me a lever long enough and a Free OS
Debian Developer to set it on, and I can move the world.
Ubuntu Developer https://www.debian.org/
slanga...@ubuntu.com vor...@debian.org
diff -Nru patsy-0.5.0+git13-g54dcf7b/debian/compat
patsy-0.5.0+git13-g54dcf7b/debian/compat
--- patsy-0.5.0+git13-g54dcf7b/debian/compat 2018-10-27 20:16:29.000000000
-0700
+++ patsy-0.5.0+git13-g54dcf7b/debian/compat 2019-08-15 21:24:18.000000000
-0700
@@ -1 +1 @@
-7
+9
diff -Nru patsy-0.5.0+git13-g54dcf7b/debian/control
patsy-0.5.0+git13-g54dcf7b/debian/control
--- patsy-0.5.0+git13-g54dcf7b/debian/control 2018-10-27 20:16:29.000000000
-0700
+++ patsy-0.5.0+git13-g54dcf7b/debian/control 2019-08-15 21:24:18.000000000
-0700
@@ -4,24 +4,17 @@
Maintainer: NeuroDebian Team <t...@neuro.debian.net>
Uploaders: Yaroslav Halchenko <deb...@onerussian.com>, Michael Hanke
<michael.ha...@gmail.com>
Build-Depends: debhelper (>= 7.0.50),
- python-all (>= 2.5),
- python-setuptools,
- python-numpy,
- python-pandas,
- python-nose,
- python-six,
- python-openpyxl,
+ dh-python,
python3-all,
python3-setuptools,
python3-numpy,
python3-pandas,
python3-nose,
python3-six,
- python-matplotlib,
- python-sphinx,
- ipython,
- ipython (>= 1.0) | ipython1x,
-X-Python-Version: >= 2.6
+ python3-matplotlib,
+ python3-sphinx,
+ ipython3,
+ ipython3 (>= 1.0) | ipython1x,
X-Python3-Version: >= 3.2
Standards-Version: 3.9.4
Homepage: http://github.com/pydata/patsy
@@ -29,25 +22,10 @@
Vcs-Git: git://github.com/neurodebian/patsy.git
XS-Testsuite: autopkgtest
-Package: python-patsy
-Architecture: all
-Depends: ${misc:Depends}, ${python:Depends},
- python-numpy,
- python-patsy,
-Recommends: python-pandas, python-openpyxl,
-Suggests: python-patsy-doc
-Description: statistical models in Python using symbolic formulas
- patsy is a Python library for describing statistical models
- (especially linear models, or models that have a linear component)
- and building design matrices.
- .
- This package contains the Python 2 version.
-
Package: python3-patsy
Architecture: all
Depends: ${misc:Depends}, ${python3:Depends},
python3-numpy,
- python3-patsy,
Recommends: python3-pandas,
Suggests: python-patsy-doc
Description: statistical models in Python using symbolic formulas
@@ -61,7 +39,7 @@
Architecture: all
Section: doc
Depends: ${misc:Depends}, libjs-jquery, libjs-underscore
-Suggests: python-patsy
+Suggests: python3-patsy
Description: documentation and examples for patsy
This package contains documentation and example scripts for
- python-patsy.
+ python3-patsy.
diff -Nru patsy-0.5.0+git13-g54dcf7b/debian/pycompat
patsy-0.5.0+git13-g54dcf7b/debian/pycompat
--- patsy-0.5.0+git13-g54dcf7b/debian/pycompat 2018-10-27 20:16:29.000000000
-0700
+++ patsy-0.5.0+git13-g54dcf7b/debian/pycompat 1969-12-31 16:00:00.000000000
-0800
@@ -1 +0,0 @@
-2
diff -Nru patsy-0.5.0+git13-g54dcf7b/debian/python-patsy.install
patsy-0.5.0+git13-g54dcf7b/debian/python-patsy.install
--- patsy-0.5.0+git13-g54dcf7b/debian/python-patsy.install 2018-10-27
20:16:29.000000000 -0700
+++ patsy-0.5.0+git13-g54dcf7b/debian/python-patsy.install 1969-12-31
16:00:00.000000000 -0800
@@ -1 +0,0 @@
-usr/lib/python2*/
diff -Nru patsy-0.5.0+git13-g54dcf7b/debian/rules
patsy-0.5.0+git13-g54dcf7b/debian/rules
--- patsy-0.5.0+git13-g54dcf7b/debian/rules 2018-10-27 20:16:29.000000000
-0700
+++ patsy-0.5.0+git13-g54dcf7b/debian/rules 2019-08-15 21:24:18.000000000
-0700
@@ -4,9 +4,7 @@
export DH_VERBOSE=1
export http_proxy=http://127.0.0.1:9/
-PACKAGE2_NAME = python-patsy
PACKAGE3_NAME = python3-patsy
-PACKAGE2_ROOT_DIR = debian/${PACKAGE2_NAME}
PACKAGE3_ROOT_DIR = debian/${PACKAGE3_NAME}
PYVERS = $(shell pyversions -vr)
@@ -17,7 +15,6 @@
UVER := $(shell LC_ALL=C dpkg-parsechangelog | awk '/^Version:/{print $$2;}' |
sed -e 's,-[^-]*$$,,g')
# Some unittests might need to be excluded for different Python versions
-EXCLUDE_TESTS2 :=
EXCLUDE_TESTS3.2 :=
#--exclude "test_bootstrap_plot"
EXCLUDE_TESTS3.3 :=
@@ -31,7 +28,7 @@
# Mega rule
%:
: # Explicit build system to avoid use of all-in-1 Makefile
- dh $@ --buildsystem=python_distutils --with python2,python3
+ dh $@ --buildsystem=pybuild --with python3
python-build%:
python$* setup.py build
@@ -43,8 +40,8 @@
python$* setup.py install --root=$(CURDIR)/debian/tmp \
--force --install-layout=deb
-override_dh_auto_install: $(PYVERS:%=python-install%)
$(PY3VERS:%=python-install%) \
- ${PYVERS:%=python-test%} ${PY3VERS:%=python-test%}
+override_dh_auto_install: $(PY3VERS:%=python-install%) \
+ ${PY3VERS:%=python-test%}
: # nothing more to do
override_dh_clean:
@@ -56,10 +53,10 @@
echo "backend : Agg" >| $(CURDIR)/build/matplotlibrc
: # Run unittests here against installed patsy
echo "$*" | grep -q '^3' && PY=3 || PY=$*; \
- export PYTHONPATH=`/bin/ls -d $$PWD/debian/tmp/usr/lib/python$$PY/*/`; \
+ export PYTHONPATH=`/bin/ls -d $$PWD/debian/tmp/usr/lib/python3/*/`; \
export MPLCONFIGDIR=$(CURDIR)/build HOME=$(CURDIR)/build; \
mkdir -p build/tmp; cd build/tmp; \
- python$* /usr/bin/nosetests -s -v $(EXCLUDE_TESTS$*) patsy;
+ python$* /usr/bin/nosetests3 -s -v $(EXCLUDE_TESTS$*) patsy;
else
: # Skip unittests due to nocheck
endif
@@ -70,7 +67,7 @@
ifneq (,$(findstring -a,$(DH_INTERNAL_OPTIONS)))
: # not building documentation in -a
else
- export PYTHONPATH=`/bin/ls -d
$$PWD/$(PACKAGE2_ROOT_DIR)/usr/lib/python$(PYVER)/*`$(IPYTHONPATH); \
+ export PYTHONPATH=`/bin/ls -d
$$PWD/$(PACKAGE3_ROOT_DIR)/usr/lib/python$(PY3VER)/*`$(IPYTHONPATH); \
export MPLCONFIGDIR=$(CURDIR)/build HOME=$(CURDIR)/build; \
make -C doc html
: # Use jquery from Debian package, so prune shipped one
diff -Nru patsy-0.5.0+git13-g54dcf7b/debian/tests/control
patsy-0.5.0+git13-g54dcf7b/debian/tests/control
--- patsy-0.5.0+git13-g54dcf7b/debian/tests/control 2018-10-27
20:16:29.000000000 -0700
+++ patsy-0.5.0+git13-g54dcf7b/debian/tests/control 2019-08-15
21:24:18.000000000 -0700
@@ -1,5 +1,2 @@
-Tests: nosetests2
-Depends: python-all, python-nose, python-numpy, python-patsy, python-openpyxl,
python-six
-
Tests: nosetests3
Depends: python3-all, python3-nose, python3-numpy, python3-patsy, python3-six
diff -Nru patsy-0.5.0+git13-g54dcf7b/debian/tests/nosetests2
patsy-0.5.0+git13-g54dcf7b/debian/tests/nosetests2
--- patsy-0.5.0+git13-g54dcf7b/debian/tests/nosetests2 2018-10-27
20:16:29.000000000 -0700
+++ patsy-0.5.0+git13-g54dcf7b/debian/tests/nosetests2 1969-12-31
16:00:00.000000000 -0800
@@ -1,33 +0,0 @@
-#!/bin/bash
-#
-# ADT test executioner for python-* packages.
-# Should be usable with any module which uses nosetests and packaged
-# as python-MODULENAME. To use for Python3, just symlink as nosetests3
-#
-# Version: 1.1
-#
-set -efu
-
-test_exec="$0"
-test_name=$(basename "$test_exec")
-test_path=$(readlink -f $0 | xargs dirname)
-
-# which tester to use is defined by the name
-tester=${test_name%%[0-9]}
-# Figure out for which version of Python this test runner was intended
-py_series=$(echo $test_exec | sed -e 's,.*\([0-9]\)$,\1,g')
-# Construct optional PY suffix which is empty for good old python2
-[ $py_series = '2' ] && PY='' || PY=$py_series
-
-# Figure out what is the name of the module we are testing
-py_module=$(sed -ne '/^Package: python/s,.*python-\(.*\),\1,gp'
$test_path/../control \
- | grep -v -e '-\(doc\|dbg\|lib\)' | head -n 1)
-
-pys="$(eval py${PY}versions -rv 2>/dev/null)"
-
-cd "$ADTTMP"
-
-for py in $pys; do
- echo "=== python$py ==="
- python$py /usr/bin/$tester$PY ${TESTER_ARGS:-} $py_module 2>&1
-done
