Hi,
I think I was able to hunt down two of the three C++ issues but I'm
stumbling here:
...
[ 90%] Building CXX object src/CMakeFiles/ccs.dir/main/ccs.cpp.o
cd /build/unanimity-3.4.1+git20180307.02aa264+dfsg/build/src && /usr/bin/c++
-I/build/unanimity-3.4.1+git20180307.02aa264+dfsg/include
-I/build/unanimity-3.4.1+git20180307.02aa264+dfsg/build/generated
-I/build/unanimity-3.4.1+git20180307.02aa264+dfsg/src -g -O2
-fdebug-prefix-map=/build/unanimity-3.4.1+git20180307.02aa264+dfsg=.
-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
-D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable
-Wno-unused-local-typedefs -fPIC -std=c++14 -o
CMakeFiles/ccs.dir/main/ccs.cpp.o -c
/build/unanimity-3.4.1+git20180307.02aa264+dfsg/src/main/ccs.cpp
/build/unanimity-3.4.1+git20180307.02aa264+dfsg/src/main/ccs.cpp: In function
‘int Runner(const PacBio::CLI::Results&)’:
/build/unanimity-3.4.1+git20180307.02aa264+dfsg/src/main/ccs.cpp:569:20: error:
expected primary-expression before ‘{’ token
569 | Subread{ReadId(movieNames[movieName], *holeNumber,
| ^
make[3]: *** [src/CMakeFiles/ccs.dir/build.make:66:
src/CMakeFiles/ccs.dir/main/ccs.cpp.o] Error 1
...
I wonder whether somebody can find a fix for the issue in this code
https://salsa.debian.org/med-team/unanimity/blob/master/src/main/ccs.cpp#L569
Thanks a lot in advance
Andreas.
--
http://fam-tille.de
