Package: src:python-cooler Version: 0.8.8-1 Severity: serious Dear Maintainer,
debci reports errors for this package's tests. There is a ModuleNotFoundError and one error with the result of `runner.invoke(show, [f_in, 'chr1', '-o', 'bla'])`. =================================== FAILURES =================================== __________________________________ test_show ___________________________________ def test_show(): runner = CliRunner() with runner.isolated_filesystem(): f_in = op.join(datadir, "toy.symm.upper.2.cool") result = runner.invoke(show, [f_in, 'chr1', '-o', 'bla']) > assert result.exit_code == 0 E assert 1 == 0 E + where 1 = <Result SystemExit(1)>.exit_code tests/test_cli_export.py:116: AssertionError _______________________________ test_print_trees _______________________________ group = <Closed HDF5 file>, expand = False, level = None def tree_widget(group, expand, level): try: > import ipytree E ModuleNotFoundError: No module named 'ipytree' /usr/lib/python3/dist-packages/cooler/fileops.py:299: ModuleNotFoundError During handling of the above exception, another exception occurred: def test_print_trees(): src_file = op.join(testdir, "data", "toy.symm.upper.2.mcool") fileops.pprint_attr_tree(src_file, level=3) fileops.pprint_data_tree(src_file, level=3) with h5py.File(src_file) as f: t = fileops.TreeViewer(f) > t._ipython_display_() tests/test_fileops.py:152: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/cooler/fileops.py:391: in _ipython_display_ tree = tree_widget(self.group, expand=self.expand, level=self.level) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ group = <Closed HDF5 file>, expand = False, level = None def tree_widget(group, expand, level): try: import ipytree except ImportError as error: > raise ImportError( "{}: Run `pip install ipytree` or `conda install ipytree`" "to get the required ipytree dependency for displaying the tree " "widget. If using jupyterlab, you also need to run " "`jupyter labextension install ipytree`".format(error) ) E ImportError: No module named 'ipytree': Run `pip install ipytree` or `conda install ipytree`to get the required ipytree dependency for displaying the tree widget. If using jupyterlab, you also need to run `jupyter labextension install ipytree` /usr/lib/python3/dist-packages/cooler/fileops.py:301: ImportError