Source: ruby-bio Version: 2.0.1-2 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: [email protected] Usertags: ruby3.0
Hi, We are about to enable building against ruby3.0 on unstable. During a test rebuild, ruby-bio was found to fail to build in that situation. To reproduce this locally, you need to install ruby-all-dev from experimental on an unstable system or build chroot. Relevant part (hopefully): > Error: test_target(Bio::TestSiRNAPair): NoMethodError: undefined method > `subseq' for "cuuucggugcggacguaaggagu":String > /<<PKGBUILDDIR>>/lib/bio/util/sirna.rb:151:in `block in design' > /<<PKGBUILDDIR>>/lib/bio/sequence/common.rb:182:in `block in window_search' > /<<PKGBUILDDIR>>/lib/bio/sequence/common.rb:181:in `step' > /<<PKGBUILDDIR>>/lib/bio/sequence/common.rb:181:in `window_search' > /<<PKGBUILDDIR>>/lib/bio/util/sirna.rb:150:in `design' > /<<PKGBUILDDIR>>/test/unit/bio/util/test_sirna.rb:110:in `setup' > =============================================================================== > ............................................................................... > ............................................................................... > ............................................................................... > ............................................................................... > ............................................................................... > ........................................................ > Finished in 45.320577728 seconds. > ------------------------------------------------------------------------------- > 3772 tests, 21042 assertions, 1 failures, 38 errors, 0 pendings, 2 omissions, > 0 notifications > 98.9655% passed > ------------------------------------------------------------------------------- > 83.23 tests/s, 464.29 assertions/s > ERROR: Test "ruby3.0" failed: The full build log is available at https://people.debian.org/~kanashiro/ruby3.0/round2/builds/3/ruby-bio/ruby-bio_2.0.1-2+rebuild1633375682_amd64.build.txt
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