Package: wnpp Severity: wishlist Owner: Charles Plessy <[EMAIL PROTECTED]>
Package name : amap-align Version : 2.0 Upstream Author : Ariel Schwartz <[EMAIL PROTECTED]> URL : http://bio.math.berkeley.edu/amap/download/amap.2.0.tar.gz License : Public domain Description : Protein multiple alignment by sequence annealing AMAP is a command line tool to perform multiple alignment of peptidic sequences. It utilizes posterior decoding, and a sequence-annealing alignment, instead of the traditional progressive alignment method. It is the only alignment program that allows to control the sensitivity / specificity tradeoff. It is based on the ProbCons source code, but uses alignment metric accuracy and eliminates the consistency transformation. . Homepage: http://bio.math.berkeley.edu/amap/ Amap has of course nothing to do with the amap already packaged for Debian ( http://packages.debian.org/unstable/net/amap ). (By the way, I am looking for sponsors for kalign, dialign and treeviewx, which I have uploaded on Mentors. http://lists.debian.org/debian-mentors/2006/05/msg00014.html ) -- Charles Plessy Wako, Saitama, Japan -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
