Source: r-bioc-biocneighbors
Version: 1.16.0+ds-1
Severity: serious
Justification: autopkgtest failure
Dear Maintainer,
The autopkgtest of your package fail with r-base (4.3.1-1):
344s [ FAIL 6 | WARN 488 | SKIP 0 | PASS 3372 ]
344s
344s ══ Failed tests
════════════════════════════════════════════════════════════════
344s ── Error ('test-find-exhaustive.R:11'): findExhaustive() behaves
correctly on simple inputs ──
344s Error in `FNN::get.knn(X, k = k)`: DLL requires the use of native symbols
344s Backtrace:
344s ▆
344s 1. └─BiocNeighbors:::refFindKNN(X, k = k) at test-find-exhaustive.R:11:12
344s 2. └─FNN::get.knn(X, k = k) at tests/testthat/setup.R:58:8
344s ── Error ('test-find-kmknn.R:11'): findKmknn() behaves correctly on
simple inputs ──
344s Error in `FNN::get.knn(X, k = k)`: DLL requires the use of native symbols
344s Backtrace:
344s ▆
344s 1. └─BiocNeighbors:::refFindKNN(X, k = k) at test-find-kmknn.R:11:12
344s 2. └─FNN::get.knn(X, k = k) at tests/testthat/setup.R:58:8
344s ── Error ('test-find-vptree.R:11'): findVptree() behaves correctly on
simple inputs ──
344s Error in `FNN::get.knn(X, k = k)`: DLL requires the use of native symbols
344s Backtrace:
344s ▆
344s 1. └─BiocNeighbors:::refFindKNN(X, k = k) at test-find-vptree.R:11:12
344s 2. └─FNN::get.knn(X, k = k) at tests/testthat/setup.R:58:8
344s ── Error ('test-query-exhaustive.R:15'): queryExhaustive() behaves
correctly with queries ──
344s Error in `FNN::get.knnx(data = X, query = Y, k = k)`: DLL requires the
use of native symbols
344s Backtrace:
344s ▆
344s 1. └─BiocNeighbors:::refQueryKNN(X, Y, k = k) at
test-query-exhaustive.R:15:12
344s 2. └─FNN::get.knnx(data = X, query = Y, k = k) at
tests/testthat/setup.R:78:8
344s ── Error ('test-query-kmknn.R:15'): queryKmknn() behaves correctly with
queries ──
344s Error in `FNN::get.knnx(data = X, query = Y, k = k)`: DLL requires the
use of native symbols
344s Backtrace:
344s ▆
344s 1. └─BiocNeighbors:::refQueryKNN(X, Y, k = k) at test-query-kmknn.R:15:12
344s 2. └─FNN::get.knnx(data = X, query = Y, k = k) at
tests/testthat/setup.R:78:8
344s ── Error ('test-query-vptree.R:15'): queryVptree() behaves correctly with
queries ──
344s Error in `FNN::get.knnx(data = X, query = Y, k = k)`: DLL requires the
use of native symbols
344s Backtrace:
344s ▆
344s 1. └─BiocNeighbors:::refQueryKNN(X, Y, k = k) at
test-query-vptree.R:15:12
344s 2. └─FNN::get.knnx(data = X, query = Y, k = k) at
tests/testthat/setup.R:78:8
344s
344s [ FAIL 6 | WARN 488 | SKIP 0 | PASS 3372 ]
https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-bioc-biocneighbors/34918493/log.gz
