Source: reapr Version: 1.0.18+dfsg-5 Severity: minor Tags: trixie sid ftbfs User: [email protected] Usertags: ftbfs-sab-20230813 ftbfs-source-after-build User: [email protected] Usertags: qa-doublebuild
Hi, This package fails to build a source package after a successful build (dpkg-buildpackage ; dpkg-buildpackage -S). This is probably a clear violation of Debian Policy section 4.9 (clean target), but this is filed as severity:minor for now, because a discussion on debian-devel showed that we might want to revisit the requirement of a working 'clean' target. More information about this class of issues, included common problems and solutions, is available at https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild Relevant part of the build log: > cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env > -us -uc -rfakeroot -S > ----------------------------------------------------------------------------------------------------------------------- > > dpkg-buildpackage: info: source package reapr > dpkg-buildpackage: info: source version 1.0.18+dfsg-5 > dpkg-buildpackage: info: source distribution unstable > dpkg-buildpackage: info: source changed by Michael R. Crusoe > <[email protected]> > dpkg-source --before-build . > fakeroot debian/rules clean > dh clean > debian/rules override_dh_auto_clean > make[1]: Entering directory '/<<PKGBUILDDIR>>' > rm -rf /<<PKGBUILDDIR>>/debian/man_src/*.html > /<<PKGBUILDDIR>>/debian/man_src/*.? > rm -rf /<<PKGBUILDDIR>>/debian/man > rm -rf /<<PKGBUILDDIR>>/debian/test > dh_auto_clean -- > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > dh_clean > dpkg-source -b . > dpkg-source: info: using source format '3.0 (quilt)' > dpkg-source: info: building reapr using existing > ./reapr_1.0.18+dfsg.orig.tar.gz > dpkg-source: info: using patch list from debian/patches/series > dpkg-source: error: cannot represent change to src/bam2fcdEstimate: binary > file contents changed > dpkg-source: error: add src/bam2fcdEstimate in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/bam2fcdEstimate' will not > be represented in diff > dpkg-source: error: cannot represent change to src/bam2fcdEstimate.o: binary > file contents changed > dpkg-source: error: add src/bam2fcdEstimate.o in > debian/source/include-binaries if you want to store the modified binary in > the debian tarball > dpkg-source: error: cannot represent change to src/bam2fragCov: binary file > contents changed > dpkg-source: error: add src/bam2fragCov in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/bam2fragCov' will not be > represented in diff > dpkg-source: error: cannot represent change to src/bam2fragCov.o: binary file > contents changed > dpkg-source: error: add src/bam2fragCov.o in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/bam2insert: binary file > contents changed > dpkg-source: error: add src/bam2insert in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/bam2insert' will not be > represented in diff > dpkg-source: error: cannot represent change to src/bam2insert.o: binary file > contents changed > dpkg-source: error: add src/bam2insert.o in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/bam2perfect: binary file > contents changed > dpkg-source: error: add src/bam2perfect in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/bam2perfect' will not be > represented in diff > dpkg-source: error: cannot represent change to src/bam2perfect.o: binary file > contents changed > dpkg-source: error: add src/bam2perfect.o in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/coveragePlot.o: binary > file contents changed > dpkg-source: error: add src/coveragePlot.o in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/errorWindow.o: binary file > contents changed > dpkg-source: error: add src/errorWindow.o in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/fa2gaps: binary file > contents changed > dpkg-source: error: add src/fa2gaps in debian/source/include-binaries if you > want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/fa2gaps' will not be > represented in diff > dpkg-source: error: cannot represent change to src/fa2gaps.o: binary file > contents changed > dpkg-source: error: add src/fa2gaps.o in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/fa2gc: binary file > contents changed > dpkg-source: error: add src/fa2gc in debian/source/include-binaries if you > want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/fa2gc' will not be > represented in diff > dpkg-source: error: cannot represent change to src/fa2gc.o: binary file > contents changed > dpkg-source: error: add src/fa2gc.o in debian/source/include-binaries if you > want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/fasta.o: binary file > contents changed > dpkg-source: error: add src/fasta.o in debian/source/include-binaries if you > want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/histogram.o: binary file > contents changed > dpkg-source: error: add src/histogram.o in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/make_plots: binary file > contents changed > dpkg-source: error: add src/make_plots in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/make_plots' will not be > represented in diff > dpkg-source: error: cannot represent change to src/make_plots.o: binary file > contents changed > dpkg-source: error: add src/make_plots.o in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/n50: binary file contents > changed > dpkg-source: error: add src/n50 in debian/source/include-binaries if you want > to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/n50' will not be > represented in diff > dpkg-source: error: cannot represent change to src/n50.o: binary file > contents changed > dpkg-source: error: add src/n50.o in debian/source/include-binaries if you > want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/scaff2contig: binary file > contents changed > dpkg-source: error: add src/scaff2contig in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/scaff2contig' will not be > represented in diff > dpkg-source: error: cannot represent change to src/scaff2contig.o: binary > file contents changed > dpkg-source: error: add src/scaff2contig.o in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/task_break: binary file > contents changed > dpkg-source: error: add src/task_break in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/task_break' will not be > represented in diff > dpkg-source: error: cannot represent change to src/task_break.o: binary file > contents changed > dpkg-source: error: add src/task_break.o in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/task_fcdrate: binary file > contents changed > dpkg-source: error: add src/task_fcdrate in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/task_fcdrate' will not be > represented in diff > dpkg-source: error: cannot represent change to src/task_fcdrate.o: binary > file contents changed > dpkg-source: error: add src/task_fcdrate.o in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/task_gapresize: binary > file contents changed > dpkg-source: error: add src/task_gapresize in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/task_gapresize' will not > be represented in diff > dpkg-source: error: cannot represent change to src/task_gapresize.o: binary > file contents changed > dpkg-source: error: add src/task_gapresize.o in > debian/source/include-binaries if you want to store the modified binary in > the debian tarball > dpkg-source: error: cannot represent change to src/task_score: binary file > contents changed > dpkg-source: error: add src/task_score in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/task_score' will not be > represented in diff > dpkg-source: error: cannot represent change to src/task_score.o: binary file > contents changed > dpkg-source: error: add src/task_score.o in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/task_stats: binary file > contents changed > dpkg-source: error: add src/task_stats in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src/task_stats' will not be > represented in diff > dpkg-source: error: cannot represent change to src/task_stats.o: binary file > contents changed > dpkg-source: error: add src/task_stats.o in debian/source/include-binaries if > you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/trianglePlot.o: binary > file contents changed > dpkg-source: error: add src/trianglePlot.o in debian/source/include-binaries > if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src/utils.o: binary file > contents changed > dpkg-source: error: add src/utils.o in debian/source/include-binaries if you > want to store the modified binary in the debian tarball > dpkg-source: error: unrepresentable changes to source > dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 29 > > E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage > --sanitize-env -us -uc -rfakeroot -S' failed to run. The full build log is available from: http://qa-logs.debian.net/2023/08/13/reapr_1.0.18+dfsg-5_unstable.log If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
