On Thu, 5 Oct 2023 10:53:06 +0100 Luma <[email protected]> wrote:
Hello, Pleas find attached a patch for Bug#1009159.
Thanks for the patch, but this looks wrong since it does not do anything other than printing out a help menu. We would like to actually test the binary for some data and verify whether output is correct. Also, it seems to even return a non-zero exit code and fails its testsuite in current scenario. Did you run the autopkgtests before submitting it? autopkgtest [22:37:50]: test run-unit-test: [----------------------- # Too few arguments handed # Printing help message: # KmerResistance-2.0 correlates genes to species from WGS data, by mapping reads with KMA # Options are: Desc: Default: Requirements: # # -i Input/query file name REQUIRED # -o Output file REQUIRED # -t_db Template DB REQUIRED # -s_db Species DB REQUIRED # -id ID threshhold 70.0 # -hid Hard ID threshhold 1.0 # -dct Depth correction threshhold 0.1 # -kma alternative KMA kma # -v Version # -h Shows this help message # autopkgtest [22:37:51]: test run-unit-test: -----------------------] autopkgtest [22:37:51]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - run-unit-test FAIL non-zero exit status 1 autopkgtest [22:37:51]: @@@@@@@@@@@@@@@@@@@@ summary run-unit-test FAIL non-zero exit status 1
