Source: obitools Version: 1.2.13+dfsg-7 Severity: serious Justification: FTBFS Tags: trixie sid ftbfs User: lu...@debian.org Usertags: ftbfs-20240313 ftbfs-trixie ftbfs-impfuncdef
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. This is most likely caused by a change in dpkg 1.22.6, that enabled -Werror=implicit-function-declaration. For more information, see https://wiki.debian.org/qa.debian.org/FTBFS#A2024-03-13_-Werror.3Dimplicit-function-declaration Relevant part (hopefully): > x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g > -fstack-protector-strong -fstack-clash-protection -Wformat > -Werror=format-security -fcf-protection -g -O2 > -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. > -fstack-protector-strong -fstack-clash-protection -Wformat > -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC > -Isrc/obitools/word -I/usr/include/python3.11 -c > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c -o > build/temp.linux-x86_64-cpython-311/build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.o > -msse2 > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c: In > function ‘__pyx_pf_8obitools_4word_10_readindex_9ReadIndex_10indexWords’: > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c:6320:3: > error: implicit declaration of function ‘heapsort’ > [-Werror=implicit-function-declaration] > 6320 | heapsort(__pyx_v_self->_wordlist, __pyx_v_i, (sizeof(pobinuc)), > __pyx_f_8obitools_4word_10_readindex_cmpwords); > | ^~~~~~~~ > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c: In > function ‘__pyx_gb_8obitools_4word_10_readindex_9ReadIndex_14generator’: > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c:6589:33: > warning: comparison of integer expressions of different signedness: ‘size_t’ > {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] > 6589 | for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { > | ^ > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c: In > function ‘__pyx_gb_8obitools_4word_10_readindex_9ReadIndex_17generator1’: > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c:6787:33: > warning: comparison of integer expressions of different signedness: ‘size_t’ > {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] > 6787 | for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { > | ^ > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c: In > function ‘__pyx_pf_8obitools_4word_10_readindex_9ReadIndex_8load’: > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c:5495:10: > warning: ignoring return value of ‘fread’ declared with attribute > ‘warn_unused_result’ [-Wunused-result] > 5495 | (void)(fread((&__pyx_v_ltbuffer), (sizeof(size_t)), 1, __pyx_v_f)); > | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c:5564:10: > warning: ignoring return value of ‘fread’ declared with attribute > ‘warn_unused_result’ [-Wunused-result] > 5564 | (void)(fread(__pyx_v_tcbuffer, 1, __pyx_v_ltbuffer, __pyx_v_f)); > | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c:5749:10: > warning: pointer ‘__pyx_v_f’ may be used after ‘fclose’ [-Wuse-after-free] > 5749 | (void)(fclose(__pyx_v_f)); > | ~^~~~~~~~~~~~~~~~~~ > build/temp.linux-x86_64-cpython-311/pyrex/obitools/word/_readindex.c:5616:10: > note: call to ‘fclose’ here > 5616 | (void)(fclose(__pyx_v_f)); > | ~^~~~~~~~~~~~~~~~~~ > cc1: some warnings being treated as errors > error: command '/usr/bin/x86_64-linux-gnu-gcc' failed with exit code 1 > E: pybuild pybuild:389: build: plugin distutils failed with: exit code=1: > /usr/bin/python3 setup.py build > dh_auto_build: error: pybuild --build -i python{version} -p 3.11 returned > exit code 13 > make: *** [debian/rules:15: binary] Error 25 The full build log is available from: http://qa-logs.debian.net/2024/03/13/obitools_1.2.13+dfsg-7_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240313;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240313&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.