Source: python-pomegranate
Version: 0.14.8-4
Severity: serious

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Hash: SHA512

Dear maintainer,

your package has an autopkgtest regression with NumPy 1.26.
Hopefully relevent excerpt from the test log:

 52s >   ???
 52s E   ValueError: The truth value of an array with more than one element is 
ambiguous. Use a.any() or a.all()
 52s
 52s pomegranate/kmeans.pyx:232: ValueError
 52s =============================== warnings summary 
===============================
 52s ../../../../usr/lib/python3/dist-packages/dateutil/tz/tz.py:37
 52s   /usr/lib/python3/dist-packages/dateutil/tz/tz.py:37: DeprecationWarning: 
datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in 
a future version. Use timezone-aware objects to represent datetimes in UTC: 
datetime.datetime.fromtimestamp(timestamp, datetime.UTC).
 52s     EPOCH = datetime.datetime.utcfromtimestamp(0)
 52s
 52s tests/test_custom_distributions.py: 29600 warnings
 52s tests/test_hmm.py: 375 warnings
 52s   /usr/lib/python3/dist-packages/joblib/parallel.py:1792: 
DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     res = func(*args, **kwargs)
 52s
 52s tests/test_custom_distributions.py: 40 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:223:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 400 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:232:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:345:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:359:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict(X), model2.predict(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:373:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict_proba(X), 
model2.predict_proba(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:387:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict_log_proba(X), 
model2.predict_log_proba(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:402:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 2000 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:411:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 40 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:493:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 400 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:504:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:620:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:634:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict(X), model2.predict(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:648:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict_proba(X), 
model2.predict_proba(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:662:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict_log_proba(X), 
model2.predict_log_proba(X))
 52s
 52s tests/test_custom_distributions.py: 200 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:679:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 2000 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:690:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 10 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:700:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 30 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:705:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_equal(model1.predict(X), model2.predict(X))
 52s
 52s tests/test_custom_distributions.py: 30 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:710:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict_proba(X), 
model2.predict_proba(X))
 52s
 52s tests/test_custom_distributions.py: 30 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:715:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict_log_proba(X), 
model2.predict_log_proba(X))
 52s
 52s tests/test_custom_distributions.py: 10 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:724:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples
 52s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples
 52s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples
 52s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:733:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 50 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:787:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 150 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:792:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict(X), model2.predict(X))
 52s
 52s tests/test_custom_distributions.py: 150 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:797:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict_proba(X), 
model2.predict_proba(X))
 52s
 52s tests/test_custom_distributions.py: 150 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:802:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.predict_log_proba(X), 
model2.predict_log_proba(X))
 52s
 52s tests/test_custom_distributions.py: 30 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:811:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s tests/test_custom_distributions.py: 20 warnings
 52s   
/tmp/autopkgtest-lxc.qczb1z7m/downtmp/autopkgtest_tmp/tests/test_custom_distributions.py:820:
 DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is 
deprecated, and will error in future. Ensure you extract a single element from 
your array before performing this operation. (Deprecated NumPy 1.25.)
 52s     assert_array_almost_equal(model1.log_probability(X), 
model2.log_probability(X))
 52s
 52s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
 52s =========================== short test summary info 
============================
 52s ERROR tests/test_kmeans.py::test_kmeans_from_samples - ValueError: The 
truth ...
 52s ERROR tests/test_kmeans.py::test_kmeans_from_samples_parallel - 
ValueError: T...
 52s ERROR tests/test_kmeans.py::test_kmeans_predict - ValueError: The truth 
value...
 52s ERROR tests/test_kmeans.py::test_kmeans_predict_parallel - ValueError: The 
tr...
 52s ERROR tests/test_kmeans.py::test_kmeans_predict_large - ValueError: The 
truth...
 52s ERROR tests/test_kmeans.py::test_kmeans_predict_large_parallel - 
ValueError: ...
 52s ERROR tests/test_kmeans.py::test_kmeans_fit - ValueError: The truth value 
of ...
 52s ERROR tests/test_kmeans.py::test_kmeans_fit_parallel - ValueError: The 
truth ...
 52s ERROR tests/test_kmeans.py::test_kmeans_multiple_init - ValueError: The 
truth...
 52s ERROR tests/test_kmeans.py::test_kmeans_ooc_from_samples - ValueError: The 
tr...
 52s ERROR tests/test_kmeans.py::test_kmeans_ooc_fit - ValueError: The truth 
value...
 52s ERROR tests/test_kmeans.py::test_kmeans_minibatch_from_samples - 
ValueError: ...
 52s ERROR tests/test_kmeans.py::test_kmeans_minibatch_fit - ValueError: The 
truth...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_from_samples - ValueError: The 
tr...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_from_samples_parallel - 
ValueErro...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_fit - ValueError: The truth 
value...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_fit_parallel - ValueError: The 
tr...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_fit_large - ValueError: The 
truth...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_fit_large_parallel - 
ValueError: ...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_predict - ValueError: The 
truth v...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_predict_parallel - ValueError: 
Th...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_large_predict - ValueError: 
The t...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_large_predict_parallel - 
ValueErr...
 52s ERROR tests/test_kmeans.py::test_kmeans_nan_multiple_init - ValueError: 
The t...
 52s ERROR tests/test_kmeans.py::test_kmeans_ooc_nan_from_samples - ValueError: 
Th...
 52s ERROR tests/test_kmeans.py::test_kmeans_ooc_nan_fit - ValueError: The 
truth v...
 52s ERROR tests/test_kmeans.py::test_kmeans_minibatch_nan_from_samples - 
ValueErr...
 52s ERROR tests/test_kmeans.py::test_kmeans_minibatch_nan_fit - ValueError: 
The t...
 52s =============== 570 passed, 37520 warnings, 28 errors in 12.06s 
================


Cheers
Timo


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