Package: src:mia Version: 2.4.7-18 Severity: serious Tags: ftbfs forky sid Dear maintainer:
During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202603/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:mia, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/<<PKGBUILDDIR>>' dh_auto_configure -- \ -DCMAKE_POLICY_VERSION_MINIMUM=3.5 \ -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON \ -DALWAYS_CREATE_DOC=ON \ -DSTRICT_DEPENDECIES=ON \ -DMIA_CREATE_MANPAGES=ON \ [... snipped ...] FFTWF_CFLAGS:INTERNAL=-I/usr/include FFTWF_CFLAGS_I:INTERNAL= FFTWF_CFLAGS_OTHER:INTERNAL= FFTWF_FOUND:INTERNAL=1 FFTWF_INCLUDEDIR:INTERNAL=/usr/include FFTWF_INCLUDE_DIRS:INTERNAL=/usr/include FFTWF_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-lfftw3f FFTWF_LDFLAGS_OTHER:INTERNAL= FFTWF_LIBDIR:INTERNAL=/usr/lib/x86_64-linux-gnu FFTWF_LIBRARIES:INTERNAL=fftw3f FFTWF_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu FFTWF_LIBS:INTERNAL= FFTWF_LIBS_L:INTERNAL= FFTWF_LIBS_OTHER:INTERNAL= FFTWF_LIBS_PATHS:INTERNAL= FFTWF_MODULE_NAME:INTERNAL=fftw3f FFTWF_PREFIX:INTERNAL=/usr FFTWF_STATIC_CFLAGS:INTERNAL=-I/usr/include FFTWF_STATIC_CFLAGS_I:INTERNAL= FFTWF_STATIC_CFLAGS_OTHER:INTERNAL= FFTWF_STATIC_INCLUDE_DIRS:INTERNAL=/usr/include FFTWF_STATIC_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-lfftw3f;-lm FFTWF_STATIC_LDFLAGS_OTHER:INTERNAL= FFTWF_STATIC_LIBDIR:INTERNAL= FFTWF_STATIC_LIBRARIES:INTERNAL=fftw3f;m FFTWF_STATIC_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu FFTWF_STATIC_LIBS:INTERNAL= FFTWF_STATIC_LIBS_L:INTERNAL= FFTWF_STATIC_LIBS_OTHER:INTERNAL= FFTWF_STATIC_LIBS_PATHS:INTERNAL= FFTWF_VERSION:INTERNAL=3.3.10 FFTWF_fftw3f_INCLUDEDIR:INTERNAL= FFTWF_fftw3f_LIBDIR:INTERNAL= FFTWF_fftw3f_PREFIX:INTERNAL= FFTWF_fftw3f_VERSION:INTERNAL= //Details about finding Boost FIND_PACKAGE_MESSAGE_DETAILS_Boost:INTERNAL=[/usr/lib/x86_64-linux-gnu/cmake/Boost-1.90.0/BoostConfig.cmake][found components: filesystem unit_test_framework serialization ][v1.90.0(1.50.0)] //Details about finding HDF5 FIND_PACKAGE_MESSAGE_DETAILS_HDF5:INTERNAL=[/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so][ ][v1.14.6()] //Details about finding JPEG FIND_PACKAGE_MESSAGE_DETAILS_JPEG:INTERNAL=[/usr/lib/x86_64-linux-gnu/libjpeg.so][/usr/include][v62()] //Details about finding PkgConfig FIND_PACKAGE_MESSAGE_DETAILS_PkgConfig:INTERNAL=[/usr/bin/pkg-config][v2.5.1()] //Details about finding Python3 FIND_PACKAGE_MESSAGE_DETAILS_Python3:INTERNAL=[/usr/bin/python3][found components: Interpreter ][v3.13.12()] //Details about finding Threads FIND_PACKAGE_MESSAGE_DETAILS_Threads:INTERNAL=[TRUE][v()] //Details about finding ZLIB FIND_PACKAGE_MESSAGE_DETAILS_ZLIB:INTERNAL=[/usr/lib/x86_64-linux-gnu/libz.so][/usr/include][ ][v1.3.1()] GSL_CFLAGS:INTERNAL=-I/usr/include GSL_CFLAGS_I:INTERNAL= GSL_CFLAGS_OTHER:INTERNAL= GSL_FOUND:INTERNAL=1 GSL_INCLUDEDIR:INTERNAL=/usr/include GSL_INCLUDE_DIRS:INTERNAL=/usr/include GSL_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-lgsl;-lgslcblas;-lm GSL_LDFLAGS_OTHER:INTERNAL= GSL_LIBDIR:INTERNAL=/usr/lib/x86_64-linux-gnu GSL_LIBRARIES:INTERNAL=gsl;gslcblas;m GSL_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu GSL_LIBS:INTERNAL= GSL_LIBS_L:INTERNAL= GSL_LIBS_OTHER:INTERNAL= GSL_LIBS_PATHS:INTERNAL= GSL_MODULE_NAME:INTERNAL=gsl GSL_PREFIX:INTERNAL=/usr GSL_STATIC_CFLAGS:INTERNAL=-I/usr/include GSL_STATIC_CFLAGS_I:INTERNAL= GSL_STATIC_CFLAGS_OTHER:INTERNAL= GSL_STATIC_INCLUDE_DIRS:INTERNAL=/usr/include GSL_STATIC_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-lgsl;-lgslcblas;-lm GSL_STATIC_LDFLAGS_OTHER:INTERNAL= GSL_STATIC_LIBDIR:INTERNAL= GSL_STATIC_LIBRARIES:INTERNAL=gsl;gslcblas;m GSL_STATIC_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu GSL_STATIC_LIBS:INTERNAL= GSL_STATIC_LIBS_L:INTERNAL= GSL_STATIC_LIBS_OTHER:INTERNAL= GSL_STATIC_LIBS_PATHS:INTERNAL= GSL_VERSION:INTERNAL=2.8 GSL_gsl_INCLUDEDIR:INTERNAL= GSL_gsl_LIBDIR:INTERNAL= GSL_gsl_PREFIX:INTERNAL= GSL_gsl_VERSION:INTERNAL= //Have include cxxabi.h HAVE_CXXABI_H:INTERNAL=1 //Have include execinfo.h HAVE_EXEINFO_H:INTERNAL=1 //Result of TRY_COMPILE HAVE_LONG_TYPE_SIZE:INTERNAL=TRUE //Have include stddef.h HAVE_STDDEF_H:INTERNAL=1 //Have include stdint.h HAVE_STDINT_H:INTERNAL=1 //Have include sys/ioctl.h HAVE_SYS_IOCTL_H:INTERNAL=1 //Have include sys/types.h HAVE_SYS_TYPES_H:INTERNAL=1 //Have include unistd.h HAVE_UNISTD_H:INTERNAL=1 //Result of TRY_COMPILE HAVE_char_TYPE_SIZE:INTERNAL=TRUE //Result of TRY_COMPILE HAVE_double_TYPE_SIZE:INTERNAL=TRUE //Result of TRY_COMPILE HAVE_float_TYPE_SIZE:INTERNAL=TRUE //Result of TRY_COMPILE HAVE_int_TYPE_SIZE:INTERNAL=TRUE //Result of TRY_COMPILE HAVE_short_TYPE_SIZE:INTERNAL=TRUE //ADVANCED property for variable: HDF5_C_COMPILER_EXECUTABLE HDF5_C_COMPILER_EXECUTABLE-ADVANCED:INTERNAL=1 //Result of TRY_COMPILE HDF5_C_COMPILER_NO_INTERROGATE:INTERNAL=FALSE //ADVANCED property for variable: HDF5_DIFF_EXECUTABLE HDF5_DIFF_EXECUTABLE-ADVANCED:INTERNAL=1 //ADVANCED property for variable: HDF5_DIR HDF5_DIR-ADVANCED:INTERNAL=1 ITPP_CFLAGS:INTERNAL=-I/usr/include ITPP_CFLAGS_I:INTERNAL= ITPP_CFLAGS_OTHER:INTERNAL= //Test ITPP_FASTICA_SEPARATE_HAS_RETURNVALUE ITPP_FASTICA_SEPARATE_HAS_RETURNVALUE:INTERNAL=1 ITPP_FOUND:INTERNAL=1 ITPP_INCLUDEDIR:INTERNAL=/usr/include ITPP_INCLUDE_DIRS:INTERNAL=/usr/include ITPP_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-litpp ITPP_LDFLAGS_OTHER:INTERNAL= ITPP_LIBDIR:INTERNAL=/usr/lib/x86_64-linux-gnu ITPP_LIBRARIES:INTERNAL=itpp ITPP_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu ITPP_LIBS:INTERNAL= ITPP_LIBS_L:INTERNAL= ITPP_LIBS_OTHER:INTERNAL= ITPP_LIBS_PATHS:INTERNAL= ITPP_MODULE_NAME:INTERNAL=itpp ITPP_PREFIX:INTERNAL=/usr ITPP_STATIC_CFLAGS:INTERNAL=-I/usr/include ITPP_STATIC_CFLAGS_I:INTERNAL= ITPP_STATIC_CFLAGS_OTHER:INTERNAL= ITPP_STATIC_INCLUDE_DIRS:INTERNAL=/usr/include ITPP_STATIC_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-litpp;/usr/lib/x86_64-linux-gnu/libfftw3.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libblas.so ITPP_STATIC_LDFLAGS_OTHER:INTERNAL=/usr/lib/x86_64-linux-gnu/libfftw3.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libblas.so ITPP_STATIC_LIBDIR:INTERNAL= ITPP_STATIC_LIBRARIES:INTERNAL=itpp ITPP_STATIC_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu ITPP_STATIC_LIBS:INTERNAL= ITPP_STATIC_LIBS_L:INTERNAL= ITPP_STATIC_LIBS_OTHER:INTERNAL= ITPP_STATIC_LIBS_PATHS:INTERNAL= ITPP_VERSION:INTERNAL=4.3.1 ITPP_itpp_INCLUDEDIR:INTERNAL= ITPP_itpp_LIBDIR:INTERNAL= ITPP_itpp_PREFIX:INTERNAL= ITPP_itpp_VERSION:INTERNAL= //ADVANCED property for variable: JPEG_INCLUDE_DIR JPEG_INCLUDE_DIR-ADVANCED:INTERNAL=1 //ADVANCED property for variable: JPEG_LIBRARY_DEBUG JPEG_LIBRARY_DEBUG-ADVANCED:INTERNAL=1 //ADVANCED property for variable: JPEG_LIBRARY_RELEASE JPEG_LIBRARY_RELEASE-ADVANCED:INTERNAL=1 //CHECK_TYPE_SIZE: sizeof(long) LONG_TYPE_SIZE:INTERNAL=8 //ADVANCED property for variable: PKG_CONFIG_ARGN PKG_CONFIG_ARGN-ADVANCED:INTERNAL=1 //ADVANCED property for variable: PKG_CONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE-ADVANCED:INTERNAL=1 //ADVANCED property for variable: WITH_FFTWD WITH_FFTWD-ADVANCED:INTERNAL=1 XML_CFLAGS:INTERNAL=-I/usr/include/libxml2;-I/usr/include XML_CFLAGS_I:INTERNAL= XML_CFLAGS_OTHER:INTERNAL= XML_FOUND:INTERNAL=1 XML_INCLUDEDIR:INTERNAL=/usr/include XML_INCLUDE_DIRS:INTERNAL=/usr/include/libxml2;/usr/include XML_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-lxml2 XML_LDFLAGS_OTHER:INTERNAL= XML_LIBDIR:INTERNAL=/usr/lib/x86_64-linux-gnu XML_LIBRARIES:INTERNAL=xml2 XML_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu XML_LIBS:INTERNAL= XML_LIBS_L:INTERNAL= XML_LIBS_OTHER:INTERNAL= XML_LIBS_PATHS:INTERNAL= XML_MODULE_NAME:INTERNAL=libxml-2.0 XML_PREFIX:INTERNAL=/usr XML_STATIC_CFLAGS:INTERNAL=-I/usr/include/libxml2;-I/usr/include XML_STATIC_CFLAGS_I:INTERNAL= XML_STATIC_CFLAGS_OTHER:INTERNAL= XML_STATIC_INCLUDE_DIRS:INTERNAL=/usr/include/libxml2;/usr/include XML_STATIC_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-lxml2;-lm;-lz XML_STATIC_LDFLAGS_OTHER:INTERNAL= XML_STATIC_LIBDIR:INTERNAL= XML_STATIC_LIBRARIES:INTERNAL=xml2;m;z XML_STATIC_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu XML_STATIC_LIBS:INTERNAL= XML_STATIC_LIBS_L:INTERNAL= XML_STATIC_LIBS_OTHER:INTERNAL= XML_STATIC_LIBS_PATHS:INTERNAL= XML_VERSION:INTERNAL=2.15.1 XML_libxml-2.0_INCLUDEDIR:INTERNAL= XML_libxml-2.0_LIBDIR:INTERNAL= XML_libxml-2.0_PREFIX:INTERNAL= XML_libxml-2.0_VERSION:INTERNAL= //ADVANCED property for variable: ZLIB_INCLUDE_DIR ZLIB_INCLUDE_DIR-ADVANCED:INTERNAL=1 //ADVANCED property for variable: ZLIB_LIBRARY_DEBUG ZLIB_LIBRARY_DEBUG-ADVANCED:INTERNAL=1 //ADVANCED property for variable: ZLIB_LIBRARY_RELEASE ZLIB_LIBRARY_RELEASE-ADVANCED:INTERNAL=1 //CMAKE_INSTALL_PREFIX during last run _GNUInstallDirs_LAST_CMAKE_INSTALL_PREFIX:INTERNAL=/usr //Compiler reason failure _Python3_Compiler_REASON_FAILURE:INTERNAL= //Development reason failure _Python3_Development_REASON_FAILURE:INTERNAL= //Path to a program. _Python3_EXECUTABLE:INTERNAL=/usr/bin/python3 //Python3 Properties _Python3_INTERPRETER_PROPERTIES:INTERNAL=Python;3;13;12;64;32;<none>;cpython-313-x86_64-linux-gnu;abi3;/usr/lib/python3.13;/usr/lib/python3.13;/usr/lib/python3/dist-packages;/usr/lib/python3/dist-packages _Python3_INTERPRETER_SIGNATURE:INTERNAL=4c8bfa8951e99fa32e4000a94f8c04a2 //NumPy reason failure _Python3_NumPy_REASON_FAILURE:INTERNAL= __pkg_config_arguments_EIGEN3:INTERNAL=REQUIRED;eigen3 __pkg_config_arguments_FFTWD:INTERNAL=fftw3;REQUIRED __pkg_config_arguments_FFTWF:INTERNAL=REQUIRED;fftw3f __pkg_config_arguments_GSL:INTERNAL=REQUIRED;gsl __pkg_config_arguments_ITPP:INTERNAL=itpp;REQUIRED __pkg_config_arguments_XML:INTERNAL=libxml-2.0;REQUIRED __pkg_config_checked_EIGEN3:INTERNAL=1 __pkg_config_checked_FFTWD:INTERNAL=1 __pkg_config_checked_FFTWF:INTERNAL=1 __pkg_config_checked_GSL:INTERNAL=1 __pkg_config_checked_ITPP:INTERNAL=1 __pkg_config_checked_XML:INTERNAL=1 //ADVANCED property for variable: boost_atomic_DIR boost_atomic_DIR-ADVANCED:INTERNAL=1 //ADVANCED property for variable: boost_exception_DIR boost_exception_DIR-ADVANCED:INTERNAL=1 //ADVANCED property for variable: boost_filesystem_DIR boost_filesystem_DIR-ADVANCED:INTERNAL=1 //ADVANCED property for variable: boost_headers_DIR boost_headers_DIR-ADVANCED:INTERNAL=1 //ADVANCED property for variable: boost_serialization_DIR boost_serialization_DIR-ADVANCED:INTERNAL=1 //ADVANCED property for variable: boost_unit_test_framework_DIR boost_unit_test_framework_DIR-ADVANCED:INTERNAL=1 //CHECK_TYPE_SIZE: sizeof(char) char_TYPE_SIZE:INTERNAL=1 //CHECK_TYPE_SIZE: sizeof(double) double_TYPE_SIZE:INTERNAL=8 //CHECK_TYPE_SIZE: sizeof(float) float_TYPE_SIZE:INTERNAL=4 //CHECK_TYPE_SIZE: sizeof(int) int_TYPE_SIZE:INTERNAL=4 //ADVANCED property for variable: pkgcfg_lib_FFTWD_fftw3 pkgcfg_lib_FFTWD_fftw3-ADVANCED:INTERNAL=1 //ADVANCED property for variable: pkgcfg_lib_FFTWF_fftw3f pkgcfg_lib_FFTWF_fftw3f-ADVANCED:INTERNAL=1 //ADVANCED property for variable: pkgcfg_lib_GSL_gsl pkgcfg_lib_GSL_gsl-ADVANCED:INTERNAL=1 //ADVANCED property for variable: pkgcfg_lib_GSL_gslcblas pkgcfg_lib_GSL_gslcblas-ADVANCED:INTERNAL=1 //ADVANCED property for variable: pkgcfg_lib_GSL_m pkgcfg_lib_GSL_m-ADVANCED:INTERNAL=1 //ADVANCED property for variable: pkgcfg_lib_ITPP_itpp pkgcfg_lib_ITPP_itpp-ADVANCED:INTERNAL=1 //ADVANCED property for variable: pkgcfg_lib_XML_xml2 pkgcfg_lib_XML_xml2-ADVANCED:INTERNAL=1 prefix_result:INTERNAL=/usr/lib/x86_64-linux-gnu //CHECK_TYPE_SIZE: sizeof(short) short_TYPE_SIZE:INTERNAL=2 dh_auto_configure: error: cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_POLICY_VERSION_MINIMUM=3.5 -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON -DALWAYS_CREATE_DOC=ON -DSTRICT_DEPENDECIES=ON -DMIA_CREATE_MANPAGES=ON -DMIA_CREATE_USERDOC=ON -DMIA_CREATE_NIPYPE_INTERFACES=OFF -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=OFF .. returned exit code 1 make[1]: *** [debian/rules:30: override_dh_auto_configure] Error 2 make[1]: Leaving directory '/<<PKGBUILDDIR>>' make: *** [debian/rules:24: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 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